1900 Add support to save patch data into NIfTI or PNG files#1922
Merged
Nic-Ma merged 8 commits intoProject-MONAI:masterfrom Apr 3, 2021
Merged
1900 Add support to save patch data into NIfTI or PNG files#1922Nic-Ma merged 8 commits intoProject-MONAI:masterfrom
Nic-Ma merged 8 commits intoProject-MONAI:masterfrom
Conversation
merge master
merge master
merge master
Signed-off-by: Nic Ma <[email protected]>
Signed-off-by: Nic Ma <[email protected]>
Contributor
Author
|
/black |
Signed-off-by: Nic Ma <[email protected]>
Contributor
Author
|
/black |
Signed-off-by: Nic Ma <[email protected]>
wyli
reviewed
Apr 2, 2021
Contributor
wyli
left a comment
There was a problem hiding this comment.
is it possible to make patch_index part of the meta_data? I feel image array + meta make more sense than array + meta + patch_index
wyli
approved these changes
Apr 3, 2021
Contributor
Author
In the sample crop, the output data is a list of dict, so I think we should add the index to the dict directly. Thanks. |
nsrivathsa
pushed a commit
to nsrivathsa/MONAI
that referenced
this pull request
Apr 12, 2021
…MONAI#1922) * [DLMED] SaveImage supports patch data Signed-off-by: Nic Ma <[email protected]> * [DLMED] fix flake8 issue Signed-off-by: Nic Ma <[email protected]> * [DLMED] fix flake8 issue Signed-off-by: Nic Ma <[email protected]> * [DLMED] fix flake8 issue Signed-off-by: Nic Ma <[email protected]> Co-authored-by: Wenqi Li <[email protected]> Signed-off-by: Neha Srivathsa <[email protected]>
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Fixes #1900 .
Description
This PR added support to save patch data into nifti or png files.
Status
Ready
Types of changes
./runtests.sh -f -u --net --coverage../runtests.sh --quick --unittests.make htmlcommand in thedocs/folder.