Skip to content

python3{11,12}Packages.mhcflurry: remove nose dependency#347990

Merged
GaetanLepage merged 1 commit intoNixOS:masterfrom
emilazy:push-yqmlosytzqpm
Oct 15, 2024
Merged

python3{11,12}Packages.mhcflurry: remove nose dependency#347990
GaetanLepage merged 1 commit intoNixOS:masterfrom
emilazy:push-yqmlosytzqpm

Conversation

@emilazy
Copy link
Member

@emilazy emilazy commented Oct 11, 2024

This package is currently broken anyway, but I have sent an untested PR upstream to migrate their tests to pytest in the hopes that it will be merged by the time we can build this again. If we fix the package before the PR is merged, hopefully we can use it as a basis for a vendored patch.

Things done

  • Built on platform(s)
    • x86_64-linux
    • aarch64-linux
    • x86_64-darwin
    • aarch64-darwin
  • For non-Linux: Is sandboxing enabled in nix.conf? (See Nix manual)
    • sandbox = relaxed
    • sandbox = true
  • Tested, as applicable:
  • Tested compilation of all packages that depend on this change using nix-shell -p nixpkgs-review --run "nixpkgs-review rev HEAD". Note: all changes have to be committed, also see nixpkgs-review usage
  • Tested basic functionality of all binary files (usually in ./result/bin/)
  • 24.11 Release Notes (or backporting 23.11 and 24.05 Release notes)
    • (Package updates) Added a release notes entry if the change is major or breaking
    • (Module updates) Added a release notes entry if the change is significant
    • (Module addition) Added a release notes entry if adding a new NixOS module
  • Fits CONTRIBUTING.md.

Add a 👍 reaction to pull requests you find important.

This package is currently broken anyway, but I have sent an untested
PR upstream to migrate their tests to pytest in the hopes that it
will be merged by the time we can build this again. If we fix the
package before the PR is merged, hopefully we can use it as a basis
for a vendored patch.
@github-actions github-actions bot added the 6.topic: python Python is a high-level, general-purpose programming language. label Oct 11, 2024
@ofborg ofborg bot requested a review from samuela October 12, 2024 02:27
@ofborg ofborg bot added 10.rebuild-darwin: 1-10 This PR causes between 1 and 10 packages to rebuild on Darwin. 10.rebuild-darwin: 1 This PR causes 1 package to rebuild on Darwin. 10.rebuild-linux: 1-10 This PR causes between 1 and 10 packages to rebuild on Linux. 10.rebuild-linux: 1 This PR causes 1 package to rebuild on Linux. labels Oct 12, 2024
@GaetanLepage
Copy link
Contributor

nixpkgs-review result

Generated using nixpkgs-review.

Command: nixpkgs-review pr 347990


x86_64-linux

⏩ 2 packages marked as broken and skipped:
  • python311Packages.mhcflurry
  • python311Packages.mhcflurry.dist

aarch64-linux

⏩ 2 packages marked as broken and skipped:
  • python311Packages.mhcflurry
  • python311Packages.mhcflurry.dist

x86_64-darwin

⏩ 2 packages marked as broken and skipped:
  • python311Packages.mhcflurry
  • python311Packages.mhcflurry.dist

aarch64-darwin

⏩ 2 packages marked as broken and skipped:
  • python311Packages.mhcflurry
  • python311Packages.mhcflurry.dist

Copy link
Contributor

@GaetanLepage GaetanLepage left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM !

@GaetanLepage GaetanLepage merged commit 8574a14 into NixOS:master Oct 15, 2024
@emilazy emilazy deleted the push-yqmlosytzqpm branch October 15, 2024 06:47
@emilazy emilazy mentioned this pull request Oct 15, 2024
13 tasks
@emilazy
Copy link
Member Author

emilazy commented Oct 15, 2024

Exciting real‐world example of three‐way merge failing to produce a conflict when it should have: #348716.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

6.topic: python Python is a high-level, general-purpose programming language. 10.rebuild-darwin: 1-10 This PR causes between 1 and 10 packages to rebuild on Darwin. 10.rebuild-darwin: 1 This PR causes 1 package to rebuild on Darwin. 10.rebuild-linux: 1-10 This PR causes between 1 and 10 packages to rebuild on Linux. 10.rebuild-linux: 1 This PR causes 1 package to rebuild on Linux.

Projects

None yet

Development

Successfully merging this pull request may close these issues.

3 participants