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Description
Is there an existing issue for this?
- I have searched the existing issues
Bug description
Hi all!
Thanks in advance for the help. I am using the latest Deeplabcut version 2.3.9. and I am encountering issues while training my own model. In particular, I am using the GUI and I am stuck at the 'Label frames' page. I manually labeled my videos and when I press 'Check labels' it gives me this error:
Traceback (most recent call last):
File "C:\Users\tgaravaldi\Desktop\virtualenvs\DLCenv\lib\site-packages\deeplabcut\gui\tabs\label_frames.py", line 62, in check_labels
check_labels(self.root.config, visualizeindividuals=self.root.is_multianimal)
File "C:\Users\tgaravaldi\Desktop\virtualenvs\DLCenv\lib\site-packages\deeplabcut\generate_training_dataset\trainingsetmanipulation.py", line 361, in check_labels
visualization.make_labeled_images_from_dataframe(
File "C:\Users\tgaravaldi\Desktop\virtualenvs\DLCenv\lib\site-packages\deeplabcut\utils\visualization.py", line 346, in make_labeled_images_from_dataframe
pt.set_data(*coord)
File "C:\Users\tgaravaldi\Desktop\virtualenvs\DLCenv\lib\site-packages\matplotlib\lines.py", line 666, in set_data
self.set_xdata(x)
File "C:\Users\tgaravaldi\Desktop\virtualenvs\DLCenv\lib\site-packages\matplotlib\lines.py", line 1290, in set_xdata
raise RuntimeError('x must be a sequence')
RuntimeError: x must be a sequence
Operating System
Winodws 11
DeepLabCut version
2.3.9.
DeepLabCut mode
single animal
Device type
cpu
Steps To Reproduce
packages:
absl-py==2.1.0
alabaster==0.7.16
app-model==0.2.7
appdirs==1.4.4
asttokens==2.4.1
astunparse==1.6.3
attrs==23.2.0
Babel==2.15.0
blosc2==2.6.2
build==1.2.1
cachetools==5.3.3
cachey==0.2.1
certifi==2024.2.2
charset-normalizer==3.3.2
click==8.1.7
cloudpickle==3.0.0
colorama==0.4.6
comm==0.2.2
contourpy==1.2.1
cycler==0.12.1
dask==2024.5.1
dask-expr==1.1.1
dask-image==2024.5.3
debugpy==1.8.1
decorator==5.1.1
deeplabcut==2.3.9
dlclibrary==0.0.6
docstring_parser==0.16
docutils==0.17.1
exceptiongroup==1.2.1
executing==2.0.1
filelock==3.14.0
filterpy==1.4.5
flatbuffers==24.3.25
fonttools==4.52.4
freetype-py==2.4.0
fsspec==2024.5.0
gast==0.4.0
google-auth==2.29.0
google-auth-oauthlib==0.4.6
google-pasta==0.2.0
grpcio==1.64.0
h5py==3.11.0
HeapDict==1.0.1
hsluv==5.0.4
huggingface-hub==0.23.2
idna==3.7
imageio==2.34.1
imageio-ffmpeg==0.4.9
imagesize==1.4.1
imgaug==0.4.0
importlib_metadata==7.1.0
in-n-out==0.2.1
ipykernel==6.29.4
ipython==8.24.0
jedi==0.19.1
Jinja2==3.1.4
joblib==1.4.2
jsonschema==4.22.0
jsonschema-specifications==2023.12.1
jupyter_client==8.6.2
jupyter_core==5.7.2
keras==2.10.0
Keras-Preprocessing==1.1.2
kiwisolver==1.4.5
lazy_loader==0.4
libclang==18.1.1
llvmlite==0.42.0
locket==1.0.0
magicgui==0.8.2
Markdown==3.6
markdown-it-py==3.0.0
MarkupSafe==2.1.5
matplotlib==3.9.0
matplotlib-inline==0.1.7
mdurl==0.1.2
msgpack==1.0.8
msgpack-numpy==0.4.8
napari==0.4.18
napari-console==0.0.9
napari-deeplabcut==0.2.1.6
napari-plugin-engine==0.2.0
napari-svg==0.1.10
natsort==8.4.0
ndindex==1.8
nest-asyncio==1.6.0
networkx==3.3
npe2==0.7.5
numba==0.59.1
numexpr==2.10.0
numpy==1.26.4
numpydoc==1.5.0
oauthlib==3.2.2
opencv-python==4.9.0.80
opencv-python-headless==4.9.0.80
opt-einsum==3.3.0
packaging==24.0
pandas==2.2.2
parso==0.8.4
partd==1.4.2
patsy==0.5.6
pillow==10.3.0
PIMS==0.6.1
Pint==0.23
platformdirs==4.2.2
pooch==1.8.1
prompt_toolkit==3.0.45
protobuf==3.19.6
psutil==5.9.8
psygnal==0.11.1
pure-eval==0.2.2
py-cpuinfo==9.0.0
pyarrow==16.1.0
pyasn1==0.6.0
pyasn1_modules==0.4.0
pyconify==0.1.6
pydantic==1.10.15
pydantic-compat==0.1.2
Pygments==2.18.0
PyOpenGL==3.1.7
pyparsing==3.1.2
pyproject_hooks==1.1.0
PySide6==6.3.1
PySide6-Addons==6.3.1
PySide6-Essentials==6.3.1
python-dateutil==2.9.0.post0
pytz==2024.1
pywin32==306
PyYAML==6.0.1
pyzmq==26.0.3
QDarkStyle==3.1
qtconsole==5.5.2
QtPy==2.4.1
referencing==0.35.1
requests==2.32.2
requests-oauthlib==2.0.0
rich==13.7.1
rpds-py==0.18.1
rsa==4.9
ruamel.yaml==0.18.6
ruamel.yaml.clib==0.2.8
scikit-image==0.23.2
scikit-learn==1.5.0
scipy==1.13.1
shapely==2.0.4
shellingham==1.5.4
shiboken6==6.3.1
six==1.16.0
slicerator==1.1.0
snowballstemmer==2.2.0
Sphinx==4.5.0
sphinxcontrib-applehelp==1.0.8
sphinxcontrib-devhelp==1.0.6
sphinxcontrib-htmlhelp==2.0.5
sphinxcontrib-jsmath==1.0.1
sphinxcontrib-qthelp==1.0.7
sphinxcontrib-serializinghtml==1.1.10
stack-data==0.6.3
statsmodels==0.14.2
superqt==0.6.6
tables==3.9.2
tabulate==0.9.0
tensorboard==2.10.1
tensorboard-data-server==0.6.1
tensorboard-plugin-wit==1.8.1
tensorflow==2.10.0
tensorflow-estimator==2.10.0
tensorflow-io-gcs-filesystem==0.31.0
tensorpack==0.11
termcolor==2.4.0
tf-slim==1.1.0
threadpoolctl==3.5.0
tifffile==2024.5.22
tomli==2.0.1
tomli_w==1.0.0
toolz==0.12.1
torch==1.12.0
tornado==6.4
tqdm==4.66.4
traitlets==5.14.3
typer==0.12.3
typing_extensions==4.12.0
tzdata==2024.1
urllib3==2.2.1
vispy==0.12.2
wcwidth==0.2.13
Werkzeug==3.0.3
wrapt==1.16.0
zipp==3.19.0
Relevant log output
No response
Anything else?
No response
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