h5py conda package no longer tied to Numpy version, causing issues #486
Description
Since yesterday, I'm seeing the following warning when installing a group of dependencies that includes h5py and Numpy:
Warning: 2 possible package resolutions (only showing differing packages):
[u'h5py-2.5.0-py27_3.tar.bz2'],
[u'h5py-2.5.0-np19py27_3.tar.bz2'],
The one that gets installed is the one not tied to Numpy:
h5py-2.5.0 | py27_3 2.4 MB
But this then causes issues later on:
INTERNALERROR> Traceback (most recent call last):
INTERNALERROR> File "/home/travis/miniconda/envs/test/lib/python2.7/site-packages/_pytest/main.py", line 88, in wrap_session
INTERNALERROR> config.hook.pytest_sessionstart(session=session)
INTERNALERROR> File "/home/travis/miniconda/envs/test/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py", line 724, in __call__
INTERNALERROR> return self._hookexec(self, self._nonwrappers + self._wrappers, kwargs)
INTERNALERROR> File "/home/travis/miniconda/envs/test/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py", line 338, in _hookexec
INTERNALERROR> return self._inner_hookexec(hook, methods, kwargs)
INTERNALERROR> File "/home/travis/miniconda/envs/test/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py", line 333, in <lambda>
INTERNALERROR> _MultiCall(methods, kwargs, hook.spec_opts).execute()
INTERNALERROR> File "/home/travis/miniconda/envs/test/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py", line 596, in execute
INTERNALERROR> res = hook_impl.function(*args)
INTERNALERROR> File "/home/travis/miniconda/envs/test/lib/python2.7/site-packages/_pytest/terminal.py", line 293, in pytest_sessionstart
INTERNALERROR> config=self.config, startdir=self.startdir)
INTERNALERROR> File "/home/travis/miniconda/envs/test/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py", line 724, in __call__
INTERNALERROR> return self._hookexec(self, self._nonwrappers + self._wrappers, kwargs)
INTERNALERROR> File "/home/travis/miniconda/envs/test/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py", line 338, in _hookexec
INTERNALERROR> return self._inner_hookexec(hook, methods, kwargs)
INTERNALERROR> File "/home/travis/miniconda/envs/test/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py", line 333, in <lambda>
INTERNALERROR> _MultiCall(methods, kwargs, hook.spec_opts).execute()
INTERNALERROR> File "/home/travis/miniconda/envs/test/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py", line 596, in execute
INTERNALERROR> res = hook_impl.function(*args)
INTERNALERROR> File "/home/travis/build/glue-viz/glue/glue/conftest.py", line 33, in pytest_report_header
INTERNALERROR> return os.linesep + glue_version + os.linesep + os.linesep + get_status()
INTERNALERROR> File "/home/travis/build/glue-viz/glue/glue/_deps.py", line 157, in get_status
INTERNALERROR> s += str(dep) + os.linesep
INTERNALERROR> File "/home/travis/build/glue-viz/glue/glue/_deps.py", line 65, in __str__
INTERNALERROR> status = 'INSTALLED (%s)' % self.version
INTERNALERROR> File "/home/travis/build/glue-viz/glue/glue/_deps.py", line 37, in version
INTERNALERROR> module = __import__(self.module)
INTERNALERROR> File "/home/travis/miniconda/envs/test/lib/python2.7/site-packages/h5py/__init__.py", line 23, in <module>
INTERNALERROR> from . import _conv
INTERNALERROR> File "h5py/h5t.pxd", line 14, in init h5py._conv (/home/ilan/minonda/conda-bld/work/h5py/_conv.c:7364)
INTERNALERROR> File "h5py/numpy.pxd", line 66, in init h5py.h5t (/home/ilan/minonda/conda-bld/work/h5py/h5t.c:20460)
INTERNALERROR> ValueError: numpy.dtype has the wrong size, try recompiling
The full log is here: https://travis-ci.org/glue-viz/glue/jobs/86499280