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put cutadapt adapters in S3 bucket

enhancementNew feature or requestNew feature or request

Status: Open.

#48 In CCBR/nf-modules;

· kelly-sovacool opened on Jul 8, 2024

"debug" toggle for bash scripts to set -exo pipefail

enhancementNew feature or requestNew feature or request

Status: Open.

#47 In CCBR/nf-modules;

· kelly-sovacool opened on Jul 8, 2024

add fastqc module

Status: Open.

#45 In CCBR/nf-modules;

· kopardev opened on Jun 20, 2024

Write in-depth tutorial to contribute and use modules & subworkflows

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#43 In CCBR/nf-modules;

· kelly-sovacool opened on Apr 2, 2024

docs: yaml_to_df() can't handle spaces in tool names

bugSomething isn't workingSomething isn't working

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#40 In CCBR/nf-modules;

· kelly-sovacool opened on Dec 1, 2023

Subworkflow for ORA / GSEA

enhancementNew feature or requestNew feature or request

Status: Open.

#33 In CCBR/nf-modules;

· kelly-sovacool opened on Oct 31, 2023

Detect which pipelines / gh repos use our modules & subworkflows

enhancementNew feature or requestNew feature or request

Status: Open.

#18 In CCBR/nf-modules;

· kelly-sovacool opened on Oct 20, 2023

Create subworkflow for peak annotation

enhancementNew feature or requestNew feature or request

Status: Open.

#10 In CCBR/nf-modules;

· kelly-sovacool opened on Oct 16, 2023

Subworkflow to create a custom blacklist fasta

enhancementNew feature or requestNew feature or request

Status: Open.

#5 In CCBR/nf-modules;

· kelly-sovacool opened on Oct 7, 2023

nf-core/modules doesn't currently support custom scripts

Status: Open.

#2 In CCBR/nf-modules;

· kelly-sovacool opened on Sep 29, 2023