Panoptica Tutorials

This folder contains several Jupyter notebooks to showcase different possible use cases of the panoptica package.
The package allows to compute instance-wise segmentation quality metrics for 2D and 3D semantic- and instance segmentation maps.

Notebooks

Semantic: Spine example

example_spine_semantic.ipynb

Matched Instance: Spine example

example_spine_matched_instance.ipynb

Unmatched Instance: Spine example

example_spine_unmatched_instance.ipynb

Matching: Spine example

example_spine_matching_algorithm.ipynb

Save/Load Configs example:

example_config.ipynb