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Updates Libsonata package to include readers improvements#940

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jorblancoa merged 1 commit intodevelopfrom
srivas/libsonata_iofix
Oct 23, 2020
Merged

Updates Libsonata package to include readers improvements#940
jorblancoa merged 1 commit intodevelopfrom
srivas/libsonata_iofix

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@sergiorg-hpc
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The new added version of Libsonata corresponds to the latest release, that includes the IO improvements made in collaboration with @jorblancoa.

More information can be found here:
https://github.com/BlueBrain/libsonata/releases/tag/v0.1.5

@sergiorg-hpc sergiorg-hpc self-assigned this Oct 22, 2020
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My apologies for the previous PR, I edited the wrong file by mistake! This should be the one :).

@jorblancoa jorblancoa merged commit fc6e34b into develop Oct 23, 2020
@jorblancoa jorblancoa deleted the srivas/libsonata_iofix branch October 23, 2020 14:07
AurelienJaquier added a commit that referenced this pull request Nov 6, 2020
* Update bbp-packages.yaml

Adding my currentscape module to bbp-packages.

* Update modules.yaml

Adding my currentscape package to the whitelist.

* Create package.py

Added my currentscape package.

* Update var/spack/repos/builtin/packages/py-currentscape/package.py

Co-authored-by: Matthias Wolf <[email protected]>

* Update var/spack/repos/builtin/packages/py-currentscape/package.py

Co-authored-by: Matthias Wolf <[email protected]>

* Update var/spack/repos/builtin/packages/py-currentscape/package.py

Co-authored-by: Matthias Wolf <[email protected]>

* Update package.py

Modified the version. Is it better now?

* update bglibpy to 4.4.6 (#937)

* Update package.py

Changing tag to match the one from source on gerrit.

* Bglibpy 4.4.10 (#938)

* update bglibpy to 4.4.6

* updated to bglpy 4.4.10

v 4.4.10 does not have the pandas, pyrsistent or the bluepy-configfile dependencies

* Updates Libsonata package to include readers improvements (#940)

* update glm to 0.9.9.3 (#943)

* Bump neurodamus for most recent patches (#942)

Bump neurodamus-py 2.0.0 to 2.0.2:
 - Fixing replay to work with multiple populations
 - Ensure data dir when skipping model build
 - Fix skipping synapse creation when weight is 0 (BBPBGLIB-673)
 - Fix deadlock when an exception is thrown from NEURON (BBPBGLIB-678)
 - Logging colors only for tty

Bump neurodamus-core 3.0.0 to 3.0.1:
 - Avoid getting nilSecRef from objects (HPCTM-1381)

* Update py-sonata-network-reduction dependencies: [email protected], [email protected] (#930)

* Update bbp-packages.yaml

Updated currentscape version.

* Update package.py

Updated version & tag.

* Brion and Brayns are dependent on GLM (#944)

* Steps updates (#941)

* gmsh: add version 4.6.0
* omega-h: new version 9.32.5.dev3
* steps: new test requirements

* libsonata-report: Improves initialization performance (#945)

* adapt brion test to a new python module name (#946)

* Adding nvidia-hpc-sdk based on upstream PR (#935)

* New compiler: nvhpc (NVIDIA HPC SDK) (spack#19294)
* Add nvhpc compiler definition: "spack compiler add" will now look
  for instances of the NVIDIA HPC SDK compiler executables
  (nvc, nvc++, nvfortran) in supplied paths
* Add the nvhpc package which installs the nvhpc compiler
* Add testing for nvhpc detection and C++-standard/pic flags

Based on spack#19294

* Add CUDA@11 required for latest NVIDIA-HPC-SDK
* Fix legacy apis : setup_environment to setup_run_environment

* NEURON and CoreNEURON should use legacy units for BBP/HBP deployment (#947)

* Update bbp-packages.yaml

Adding my currentscape module to bbp-packages.

* Update modules.yaml

Adding my currentscape package to the whitelist.

* Create package.py

Added my currentscape package.

* Update var/spack/repos/builtin/packages/py-currentscape/package.py

Co-authored-by: Matthias Wolf <[email protected]>

* Update var/spack/repos/builtin/packages/py-currentscape/package.py

Co-authored-by: Matthias Wolf <[email protected]>

* Update var/spack/repos/builtin/packages/py-currentscape/package.py

Co-authored-by: Matthias Wolf <[email protected]>

* Update package.py

Modified the version. Is it better now?

* Update package.py

Changing tag to match the one from source on gerrit.

* Update bbp-packages.yaml

Updated currentscape version.

* Update package.py

Updated version & tag.

Co-authored-by: Matthias Wolf <[email protected]>
Co-authored-by: anilbey <[email protected]>
Co-authored-by: Sergio <[email protected]>
Co-authored-by: ppodhajski <[email protected]>
Co-authored-by: Fernando Pereira <[email protected]>
Co-authored-by: asanin-epfl <[email protected]>
Co-authored-by: Nadir Román Guerrero <[email protected]>
Co-authored-by: Tristan Carel <[email protected]>
Co-authored-by: Pramod Kumbhar <[email protected]>
Co-authored-by: Jaquier Aurélien Tristan <[email protected]>
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3 participants