Skip to content

3.0 Tips and Tricks

Bruno Manuel Santos Saraiva edited this page Apr 26, 2021 · 5 revisions
  • When not using a phase contrast image, local average seems to be working better for mask computation
  • To avoid clusters of cells in your images make sure to:
    • Go to the microscope immediately after putting your sample on the slide
    • Not apply too much pressure on the cover slip
  • Images without clusters are better even if you have to analyse more due to having less cells:
    • Better automatic segmentation == faster analysis

Visualization tools

  1. Zoom-out image completely
  2. and 3. Go to previous zoom
  3. Left click to drag image, right-click+drag to zoom
  4. Zoom to box
  5. Do not use
  6. save a png image file of current view

Clone this wiki locally