README updates/citation#471
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baperry2 merged 5 commits intoAMReX-Combustion:developmentfrom Jan 26, 2024
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* Explicit filtering of hydro fluxes and source term. (AMReX-Combustion#112) This commit implements explicit filtering of the hydro fluxes and source term (for both MOL and PPM code paths). This is necessary to perform explicitly filtered Large Eddy Simulations. Contains: - regressions tests - documentation - CMake implementation * Remove legacy Fortran code. (AMReX-Combustion#252) * Use default for trivial constructors and only build HIP in CI for gfx908 (AMReX-Combustion#434) * Use default for trivial constructors. * Only build HIP in CI for gfx908. * Update PelePhysics. * Fixes to header files (AMReX-Combustion#439) * Fixes to header files. * Update PelePhysics submodule. * More fixes. * Initialize xdiff in HIT. * Invert some mfiter loops (AMReX-Combustion#446) Co-authored-by: Jon Rood <[email protected]> * Add GPU syncs because MF ParallelFor is non-blocking (AMReX-Combustion#471) * Rename header guards (AMReX-Combustion#506) * Replace _OPENMP with AMREX_USE_OMP to support Ascent. (AMReX-Combustion#519) * Address some warnings (AMReX-Combustion#554) * remove dependence of Filter on Utilities (#710) * move files * docs for filter * use amrex Pi instead of PeleC Pi --------- Co-authored-by: Marc T. Henry de Frahan <[email protected]> Co-authored-by: Jon Rood <[email protected]>
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Update the README to reflect the recent reorg. Add contributing guidelines.
Add some articles to be used as citations: the new PeleMP paper and SIAM-PP paper. When the chemistry paper comes out, that can be added as well.