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NVIDIA Parabricks fq2bam performance
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0
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15
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November 27, 2025
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Fq2bam sometimes gives an error
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2
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126
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September 18, 2025
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GPUS+SLURM+NVIDIA/Parabricks : sometimes I get "cudaGetDevice() failed in geting device ID. Status: unknown error, exiting"
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0
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44
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September 10, 2025
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4.5.0-1 : Haplotype Caller : Number of GPUs requested (2) is more than number of GPUs (0) in the system., exitin
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2
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82
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September 8, 2025
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Getting into recovery mode while using pbrun fq2bam
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0
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62
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June 30, 2025
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"Could not run fq2bam" Is the only verbose output from Parabricks 4.4.0-1 and 4.3.2-1 on tutorial data
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15
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384
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March 3, 2025
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Help with performance from Parabricks on SLURM HPC cluster using Snakemake
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0
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100
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February 7, 2025
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Pbbwa hangs and don't writes bam, but the memory is occupied
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0
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94
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January 30, 2025
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Memory issues while running Marking Duplicates and BQSR
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0
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71
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January 21, 2025
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Encountering Bugs/Errors with Germline pipeline - Seeking Help!
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5
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148
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January 17, 2025
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Request for Error-Skipping Option in fq2bam When Handling Fastq Format Issues
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2
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61
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January 15, 2025
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Fq2bam on GCP
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10
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161
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December 11, 2024
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Single-ended recovery mode
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4
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174
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December 9, 2024
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Could not run fq2bam as part of germline pipeline (Version 4.0.1-1 )
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11
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275
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December 9, 2024
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Fq2bamfast index files
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1
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125
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December 6, 2024
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Can't use fq2bam (V4.4.0) with terminate called after throwing an instance of 'std::system_error'
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1
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115
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December 4, 2024
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Parabrick 4.3.1 fq2bam meth takes up too much memory
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3
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124
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November 25, 2024
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No sample names in bam header when using rna_fq2bam
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1
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67
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October 23, 2024
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Fq2bamfast paired file error vs fq2bam Version 4.3.1-1
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4
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129
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October 1, 2024
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Clara Parabricks v4.0.1 fq2bam cutadapt illegal memory error
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0
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99
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July 26, 2024
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