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PACBB 2014: Salamanca, Spain
- Julio Saez-Rodriguez, Miguel P. Rocha

, Florentino Fdez-Riverola
, Juan F. De Paz Santana
:
8th International Conference on Practical Applications of Computational Biology & Bioinformatics, PACBB 2014, 4-6 June, 2014, Salamanca, Spain. Advances in Intelligent Systems and Computing 294, Springer 2014, ISBN 978-3-319-07580-8 - Sebastien Alameda, Carole Bernon, Jean-Pierre Mano:

Agent-Based Model for Phenotypic Prediction Using Genomic and Environmental Data. 1-8 - José Luis López-Pérez

, Roberto Therón
, Esther del Olmo
, Beatriz Santos-Buitrago, José Francisco Adserias, Carlos Estévez, Carlos García Cuadrado, David Eguiluz López, Gustavo Santos-García
:
NAPROC-13: A Carbon NMR Web Database for the Structural Elucidation of Natural Products and Food Phytochemicals. 9-19 - Pablo Chamoso

, Luis García-Ortiz, José I. Recio-Rodríguez
, Manuel A. Gómez-Marcos:
Platform Image Processing Applied to the Study of Retinal Vessels. 21-30 - Sherin M. ElGokhy, Tetsuo Shibuya, Amin A. Shoukry

:
Improving miRNA Classification Using an Exhaustive Set of Features. 31-39 - Ana Margarida Sousa

, Maria Olívia Pereira
, Nuno F. Azevedo
, Anália Lourenço
:
Designing an Ontology Tool for the Unification of Biofilms Data. 41-48 - Gael Pérez Rodríguez

, Daniel Glez-Peña
, Nuno F. Azevedo
, Maria Olívia Pereira
, Florentino Fdez-Riverola
, Anália Lourenço
:
BEW: Bioinformatics Workbench for Analysis of Biofilms Experimental Data. 49-56 - Rodolfo Moresco

, Virgílio G. Uarrota
, Eduardo da C. Nunes
, Bianca Coelho, Edna Regina Amante, Vanessa Maria Gervin, Carlos Eduardo M. Campos, Miguel P. Rocha
, Marcelo Maraschin:
Discrimination of Brazilian Cassava Genotypes (Manihot esculenta Crantz) According to Their Physicochemical Traits and Functional Properties through Bioinformatics Tools. 57-63 - Vladimir R. Vukic

, Dajana Hrnjez, Spasenija Milanovic, Mirela Ilicic, Katarina Kanuric, Edward Petri:
Prediction of Active Residues of β-galactosidase from Bacteroides thetaiotaomicron. 65-71 - Ondrej Strnad

, Barbora Kozlíková
, Jiri Sochor:
Detection of Intramolecular Tunnels Connecting Sequence of Sites in Protein Structures. 73-80 - Doruk Pancaroglu, Mehmet Tan

:
Improving Positive Unlabeled Learning Algorithms for Protein Interaction Prediction. 81-88 - Caroline König

, René Alquézar, Alfredo Vellido, Jesús Giraldo:
Finding Class C GPCR Subtype-Discriminating N-grams through Feature Selection. 89-96 - Boris Brimkov, Valentin E. Brimkov:

Geometric Approach to Biosequence Analysis. 97-104 - José Ignacio Requeno

, José Manuel Colom:
Timed and Probabilistic Model Checking over Phylogenetic Trees. 105-112 - Yingbo Cui, Xiangke Liao, Xiaoqian Zhu, Bingqiang Wang, Shaoliang Peng

:
mBWA: A Massively Parallel Sequence Reads Aligner. 113-120 - Alberto Montañola, Concepció Roig

, Porfidio Hernández
:
Optimizing Multiple Pairwise Alignment of Genomic Sequences in Multicore Clusters. 121-128 - Germán Retamosa, Luis de Pedro

, Iván González, Javier Tamames
:
High Performance Genomic Sequencing: A Filtered Approach. 129-136 - Vera Afreixo

, João M. O. S. Rodrigues
, Carlos A. C. Bastos
:
Exceptional Single Strand DNA Word Symmetry: Universal Law? 137-143 - Luísa Castro

, José Luís Oliveira
, Raquel M. Silva
:
Mutation Analysis in PARK2 Gene Uncovers Patterns of Associated Genetic Variants. 145-152 - Shima Soroushnia, Masoud Daneshtalab

, Juha Plosila
, Pasi Liljeberg:
Heterogeneous Parallelization of Aho-Corasick Algorithm. 153-160 - Alejandro Fernández Villaverde

, Sophia Bongard, Klaus Mauch, Dirk Müller, Eva Balsa-Canto
, Joachim Schmid, Julio R. Banga
:
High-Confidence Predictions in Systems Biology Dynamic Models. 161-171 - David R. Penas

, Julio R. Banga
, Patricia González
, Ramon Doallo:
A Parallel Differential Evolution Algorithm for Parameter Estimation in Dynamic Models of Biological Systems. 173-181 - Octavio Perez-Garcia

, Silas Granato Villas-Bôas
, Naresh Singhal:
A Method to Calibrate Metabolic Network Models with Experimental Datasets. 183-190 - Pedro Barbosa, Oscar Dias

, Joel P. Arrais
, Miguel Rocha
:
Metagenomic Analysis of the Saliva Microbiome with Merlin. 191-199 - Paula Jorge

, Maria Olívia Pereira
, Anália Lourenço
:
Networking the Way towards Antimicrobial Combination Therapies. 201-206 - Gustavo Santos-García

, Javier De Las Rivas, Carolyn L. Talcott:
A Logic Computational Framework to Query Dynamics on Complex Biological Pathways. 207-214 - Filipe Liu

, Paulo Vilaça
, Isabel Rocha
, Miguel Rocha
:
Evaluating Pathway Enumeration Algorithms in Metabolic Engineering Case Studies. 215-223 - A. Seara Vieira

, Eva Lorenzo Iglesias
, Lourdes Borrajo
:
T-HMM: A Novel Biomedical Text Classifier Based on Hidden Markov Models. 225-234 - Roberto Costumero, Consuelo Gonzalo-Martín

, Ernestina Menasalvas
:
TIDA: A Spanish EHR Semantic Search Engine. 235-242 - Rubén Romero

, A. Seara Vieira
, Eva Lorenzo Iglesias
, Lourdes Borrajo
:
BioClass: A Tool for Biomedical Text Classification. 243-251 - Andre Lamurias

, João D. Ferreira
, Francisco M. Couto
:
Chemical Named Entity Recognition: Improving Recall Using a Comprehensive List of Lexical Features. 253-260 - José Ferrnandes

, Anália Lourenço
:
Bringing Named Entity Recognition on Drupal Content Management System. 261-268 - Martín Pérez-Pérez

, Daniel Glez-Peña
, Florentino Fdez-Riverola
, Anália Lourenço
:
Marky: A Lightweight Web Tracking Tool for Document Annotation. 269-276 - Pedro Sernadela

, Eelke van der Horst, Mark Thompson, Pedro Lopes, Marco Roos
, José Luís Oliveira
:
A Nanopublishing Architecture for Biomedical Data. 277-284 - Martin Krallinger

, Florian Leitner, Alfonso Valencia
:
Retrieval and Discovery of Cell Cycle Literature and Proteins by Means of Machine Learning, Text Mining and Network Analysis. 285-292

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