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2020 – today
- 2026
[j99]Zhiyuan Li, Kurt G. Schilling, Bennett A. Landman:
Robust Containerization of the High Angular Resolution Functional Imaging (HARFI) Pipeline. Neuroinformatics 24(1): 10 (2026)- [i136]Chongyu Qu, Zhengyi Lu, Yuxiang Lai, Thomas Z. Li, Junchao Zhu, Junlin Guo, Juming Xiong, Yanfan Zhu, Yuechen Yang, Allen J. Luna, Kim L. Sandler, Bennett A. Landman, Yuankai Huo:
AdaFuse: Adaptive Multimodal Fusion for Lung Cancer Risk Prediction via Reinforcement Learning. CoRR abs/2602.00347 (2026) - [i135]Zhengyi Lu, Ming Lu, Chongyu Qu, Junchao Zhu, Junlin Guo, Marilyn Lionts, Yanfan Zhu, Yuechen Yang, Tianyuan Yao, Jayasai Rajagopal, Bennett Allan Landman, Xiao Wang, Xinqiang Yan, Yuankai Huo:
MASC: Metal-Aware Sampling and Correction via Reinforcement Learning for Accelerated MRI. CoRR abs/2602.00348 (2026) - [i134]Owen Dong, Lily Gao, Manish Kota, Bennett A. Landman, Jelena Bekvalac, Gaynor Western, Katherine D. Van Schaik:
Zero-shot large vision-language model prompting for automated bone identification in paleoradiology x-ray archives. CoRR abs/2602.03750 (2026) - 2025
- [j98]Chenyu Gao
, Kaiwen Xu, Michael E. Kim, Lianrui Zuo, Zhiyuan Li, Derek B. Archer, Timothy J. Hohman, Ann Zenobia Moore, Luigi Ferrucci, Lori L. Beason-Held, Susan M. Resnick, Christos Davatzikos, Jerry L. Prince, Bennett A. Landman:
Pitfalls of defacing whole-head MRI: re-identification risk with diffusion models and compromised research potential. Comput. Biol. Medicine 197: 111112 (2025) - [j97]Thomas A. Lasko, William W. Stead, John M. Still, Thomas Z. Li, Michael N. Kammer, Marco Barbero Mota, Eric V. Strobl, Bennett A. Landman, Fabien Maldonado:
Unsupervised discovery of clinical disease signatures using probabilistic independence. J. Biomed. Informatics 166: 104837 (2025) - [j96]David S. Smith, Karthik Ramadass, Laura M. Jones, Jennifer Morse, Daniel Fabbri, Joseph R. Coco, Shunxing Bao, Melissa A. Basford, Peter J. Embi, Reed A. Omary, John C. Gore, Jill M. Pulley, Bennett A. Landman:
Secondary use of radiological imaging data: Vanderbilt's ImageVU approach. J. Biomed. Informatics 170: 104905 (2025) - [c185]Xinran Liu, Yikun Bai, Rocio Diaz Martin, Kaiwen Shi, Ashkan Shahbazi, Bennett Allan Landman, Catie Chang, Soheil Kolouri:
Linear Spherical Sliced Optimal Transport: A Fast Metric for Comparing Spherical Data. ICLR 2025 - [c184]Bohan Jiang, Andrew McNeil, Yihao Liu, Gaurav Rudravaram, Inga Saknite, Placide Mbala-Kingebeni, Olivier Tshiani Mbaya, Tyra Silaphet, Rachel Weiss, Lori E. Dodd, Veronique Nussenblatt, Daniel Moyer, Bennett A. Landman, Benoit M. Dawant, Eric R. Tkaczyk:
Deep Automatic Alignment of Mpox Dermatological Hand Photography. ISBI 2025: 1-5 - [c183]Dingjie Su, Katherine D. Van Schaik, Lucas W. Remedios, Thomas Z. Li, Fabien Maldonado, Kim L. Sandler, Benoit M. Dawant, Bennett A. Landman:
CT Contrast Phase Identification by Predicting the Temporal Angle Using Circular Regression. ISBI 2025: 1-5 - [c182]Greyson A. Wintergerst, Samuel W. Remedios, Allen T. Newton, Seth A. Smith, Bennett A. Landman, Kurt G. Schilling:
Measuring Impact of Super-Resolution on Spinal Cord MRI Scans: Lesion Detection Sensitivity, Variability, and Clinical Impact. ISBI 2025: 1-5 - [c181]Jongyeon Yoon, Mingxing Rao, Elyssa M. McMaster, Chloe Cho, Nancy R. Newlin, Kurt G. Schilling, Bennett A. Landman, Daniel Moyer:
Transformer-Based T1-Tractography. ISBI 2025: 1-5 - [i133]Yanfan Zhu, Isaac Lyngaas, Muralikrishnan Gopalakrishnan Meena, Mary Ellen Koran, Bradley A. Malin, Daniel Moyer, Shunxing Bao, Anuj J. Kapadia, Xiao Wang, Bennett A. Landman, Yuankai Huo:
Scale-up Unlearnable Examples Learning with High-Performance Computing. CoRR abs/2501.06080 (2025) - [i132]Lianrui Zuo, Kaiwen Xu, Dingjie Su, Xin Yu, Aravind R. Krishnan, Yihao Liu, Shunxing Bao, Thomas Z. Li, Kim L. Sandler, Fabien Maldonado, Bennett A. Landman:
Beyond the Lungs: Extending the Field of View in Chest CT with Latent Diffusion Models. CoRR abs/2501.13068 (2025) - [i131]Lianrui Zuo, Xin Yu, Dingjie Su, Kaiwen Xu, Aravind R. Krishnan, Yihao Liu, Shunxing Bao, Fabien Maldonado, Luigi Ferrucci, Bennett A. Landman:
Robust Body Composition Analysis by Generating 3D CT Volumes from Limited 2D Slices. CoRR abs/2501.13071 (2025) - [i130]Tianyuan Yao, Zhiyuan Li, Praitayini Kanakaraj, Derek B. Archer, Kurt Schilling, Lori L. Beason-Held, Susan M. Resnick, Bennett A. Landman, Yuankai Huo:
Polyhedra Encoding Transformers: Enhancing Diffusion MRI Analysis Beyond Voxel and Volumetric Embedding. CoRR abs/2501.13352 (2025) - [i129]Chongyu Qu, Ritchie Zhao, Ye Yu, Bin Liu, Tianyuan Yao, Junchao Zhu, Bennett A. Landman, Yucheng Tang, Yuankai Huo:
Post-Training Quantization for 3D Medical Image Segmentation: A Practical Study on Real Inference Engines. CoRR abs/2501.17343 (2025) - [i128]Chenyu Gao, Kaiwen Xu, Michael E. Kim, Lianrui Zuo, Zhiyuan Li, Derek B. Archer, Timothy J. Hohman, Ann Zenobia Moore, Luigi Ferrucci, Lori L. Beason-Held, Susan M. Resnick, Christos Davatzikos, Jerry L. Prince, Bennett A. Landman:
Pitfalls of defacing whole-head MRI: re-identification risk with diffusion models and compromised research potential. CoRR abs/2501.18834 (2025) - [i127]Aravind R. Krishnan, Yihao Liu, Kaiwen Xu, Michael E. Kim, Lucas W. Remedios, Gaurav Rudravaram, Adam M. Saunders, Bradley W. Richmond, Kim L. Sandler, Fabien Maldonado, Bennett A. Landman, Lianrui Zuo:
Investigating the impact of kernel harmonization and deformable registration on inspiratory and expiratory chest CT images for people with COPD. CoRR abs/2502.05119 (2025) - [i126]Ruining Deng, Tianyuan Yao, Yucheng Tang, Junlin Guo, Siqi Lu, Juming Xiong, Lining Yu, Quan Huu Cap, Pengzhou Cai, Libin Lan, Ze Zhao, Adrian Galdran, Amit Kumar, Gunjan Deotale, Dev Kumar Das, Inyoung Paik, Joonho Lee, Geongyu Lee, Yujia Chen, Wangkai Li, Zhaoyang Li, Xuege Hou, Zeyuan Wu, Shengjin Wang, Maximilian Fischer, Lars Kramer, Anghong Du, Le Zhang, Maria Sanchez Sanchez, Helena Sanchez Ulloa, David Ribalta Heredia, Carlos Perez de Arenaza Garcia, Shuoyu Xu, Bingdou He, Xinping Cheng, Tao Wang, Noémie Moreau, Katarzyna Bozek, Shubham Innani, Ujjwal Baid, Kaura Solomon Kefas, Bennett A. Landman, Yu Wang, Shilin Zhao, Mengmeng Yin, Haichun Yang, Yuankai Huo:
KPIs 2024 Challenge: Advancing Glomerular Segmentation from Patch- to Slide-Level. CoRR abs/2502.07288 (2025) - [i125]Ho Hin Lee, Quan Liu, Shunxing Bao, Yuankai Huo, Bennett A. Landman:
Rep3D: Re-parameterize Large 3D Kernels with Low-Rank Receptive Modeling for Medical Imaging. CoRR abs/2505.19603 (2025) - [i124]Aravind R. Krishnan, Thomas Z. Li, Lucas W. Remedios, Michael E. Kim, Chenyu Gao, Gaurav Rudravaram, Elyssa M. McMaster, Adam M. Saunders, Shunxing Bao, Kaiwen Xu, Lianrui Zuo, Kim L. Sandler, Fabien Maldonado, Yuankai Huo, Bennett A. Landman:
Multipath cycleGAN for harmonization of paired and unpaired low-dose lung computed tomography reconstruction kernels. CoRR abs/2505.22568 (2025) - [i123]Can Cui, Xindong Zheng, Ruining Deng, Quan Liu, Tianyuan Yao, Keith T. Wilson, Lori A. Coburn, Bennett A. Landman, Haichun Yang, Yaohong Wang, Yuankai Huo:
Quantitative Benchmarking of Anomaly Detection Methods in Digital Pathology. CoRR abs/2506.19234 (2025) - [i122]Zhiyuan Li, Kurt G. Schilling, Bennett A. Landman:
Robust Containerization of the High Angular Resolution Functional Imaging (HARFI) Pipeline. CoRR abs/2507.07010 (2025) - [i121]Lucas W. Remedios, Chloe Cho, Trent M. Schwartz, Dingjie Su, Gaurav Rudravaram, Chenyu Gao, Aravind R. Krishnan, Adam M. Saunders, Michael E. Kim, Shunxing Bao, Alvin C. Powers, Bennett A. Landman, John Virostko:
Data-Driven Abdominal Phenotypes of Type 2 Diabetes in Lean, Overweight, and Obese Cohorts. CoRR abs/2508.11063 (2025) - [i120]Lucas W. Remedios, Chloe Cho, Trent M. Schwartz, Dingjie Su, Gaurav Rudravaram, Chenyu Gao, Aravind R. Krishnan, Adam M. Saunders, Michael E. Kim, Shunxing Bao, Thomas A. Lasko, Alvin C. Powers, Bennett A. Landman, John Virostko:
Lifespan Pancreas Morphology for Control vs Type 2 Diabetes using AI on Largescale Clinical Imaging. CoRR abs/2508.14878 (2025) - [i119]Chongyu Qu, Allen J. Luna, Thomas Z. Li, Junchao Zhu, Junlin Guo, Juming Xiong, Kim L. Sandler, Bennett A. Landman, Yuankai Huo:
Cohort-Aware Agents for Individualized Lung Cancer Risk Prediction Using a Retrieval-Augmented Model Selection Framework. CoRR abs/2508.14940 (2025) - [i118]Yihao Liu, Junyu Chen, Lianrui Zuo, Shuwen Wei, Brian D. Boyd, Carmen Andreescu, Olusola Ajilore, Warren D. Taylor, Aaron Carass, Bennett A. Landman:
Surrogate Supervision for Robust and Generalizable Deformable Image Registration. CoRR abs/2509.09869 (2025) - [i117]Thomas Z. Li, Aravind R. Krishnan, Lianrui Zuo, John M. Still, Kim L. Sandler, Fabien Maldonado, Thomas A. Lasko, Bennett A. Landman:
Self-supervised learning of imaging and clinical signatures using a multimodal joint-embedding predictive architecture. CoRR abs/2509.15470 (2025) - [i116]Jongyeon Yoon, Elyssa M. McMaster, Michael E. Kim, Gaurav Rudravaram, Kurt G. Schilling, Bennett A. Landman, Daniel Moyer:
Fully Differentiable dMRI Streamline Propagation in PyTorch. CoRR abs/2511.14807 (2025) - [i115]Gaurav Rudravaram, Lianrui Zuo, Adam M. Saunders, Michael E. Kim, Praitayini Kanakaraj, Nancy R. Newlin, Aravind R. Krishnan, Elyssa M. McMaster, Chloe Cho, Susan M. Resnick, Lori L. Beason-Held, Derek B. Archer, Timothy J. Hohman, Daniel Moyer, Bennett A. Landman:
Characterizing Continuous and Discrete Hybrid Latent Spaces for Structural Connectomes. CoRR abs/2512.02032 (2025) - [i114]Yihao Liu, Chenyu Gao, Lianrui Zuo, Michael E. Kim, Brian D. Boyd, Lisa L. Barnes, Walter Kukull, Lori L. Beason-Held, Susan M. Resnick, Timothy J. Hohman, Warren D. Taylor, Bennett A. Landman:
MetaVoxel: Joint Diffusion Modeling of Imaging and Clinical Metadata. CoRR abs/2512.10041 (2025) - [i113]Annika Reinke, Evangelia Christodoulou, Sthuthi Sadananda, A. Emre Kavur, Khrystyna Faryna, Daan Schouten, Bennett A. Landman, Carole H. Sudre, Olivier Colliot, Nicholas Heller, Sophie Loizillon, Martin Maska, Maëlys Solal, Arya Yazdan Panah, Vilma Bozgo, Ömer Sümer, Siem de Jong, Sophie Fischer, Michal Kozubek, Tim Rädsch, Nadim Hammoud, Fruzsina Molnár-Gábor, Steven Hicks, Michael A. Riegler, Anindo Saha, Vajira Thambawita, Pål Halvorsen, Amelia Jiménez-Sánchez, Qingyang Yang, Veronika Cheplygina, Sabrina Bottazzi, Alexander Seitel, Spyridon Bakas, Alexandros Karargyris, Kiran Vaidhya Venkadesh, Bram van Ginneken, Lena Maier-Hein:
Medical Imaging AI Competitions Lack Fairness. CoRR abs/2512.17581 (2025) - 2024
- [j95]Ruining Deng, Can Cui, Lucas W. Remedios, Shunxing Bao, R. Michael Womick, Sophie Chiron, Jia Li, Joseph T. Roland, Ken S. Lau, Qi Liu, Keith T. Wilson, Yaohong Wang, Lori A. Coburn, Bennett A. Landman, Yuankai Huo:
Cross-scale multi-instance learning for pathological image diagnosis. Medical Image Anal. 94: 103124 (2024) - [j94]Praitayini Kanakaraj, Tianyuan Yao, Leon Y. Cai, Ho Hin Lee, Nancy R. Newlin, Michael E. Kim, Chenyu Gao, Kimberly R. Pechman, Derek B. Archer, Timothy J. Hohman, Angela L. Jefferson, Lori L. Beason-Held, Susan M. Resnick, Eleftherios Garyfallidis, Adam W. Anderson, Kurt G. Schilling, Bennett A. Landman, Daniel Moyer:
DeepN4: Learning N4ITK Bias Field Correction for T1-weighted Images. Neuroinformatics 22(2): 193-205 (2024) - [c180]Shunxing Bao, Junlin Guo, Ho Hin Lee, Ruining Deng, Can Cui, Lucas W. Remedios, Quan Liu, Qi Yang, Kaiwen Xu, Xin Yu, Jia Li, Yike Li, Joseph T. Roland, Qi Liu, Ken S. Lau, Keith T. Wilson, Lori A. Coburn, Bennett A. Landman, Yuankai Huo:
Mitigating Over-Saturated Fluorescence Images Through a Semi-Supervised Generative Adversarial Network. ISBI 2024: 1-5 - [c179]Tianyuan Yao, Derek B. Archer, Zhiyuan Li, Leon Y. Cai, Praitayini Kanakaraj, Nancy Newlin, Quan Liu, Ruining Deng, Can Cui, Shunxing Bao, Kurt Schilling, Bennett A. Landman, Yuankai Huo:
Ts-FWE: Token-Aware Single-Shell Free Water Estimation for Brain Diffusion MRI. CDMRI@MICCAI 2024: 132-142 - [c178]Nancy Newlin, Kurt Schilling, Serge Koudoro, Bramsh Qamar Chandio, Praitayini Kanakaraj, Daniel Moyer, Claire E. Kelly, Sila Genc, Joseph Yuan-Mou Yang, Ye Wu, Nagesh Adluru, Vishwesh Nath, Sudhir K. Pathak, Walter Schneider, Anurag Gade, William Consagra, Yogesh Rathi, Tom Hendriks, Anna Vilanova, Maxime Chamberland, Tomasz Pieciak, Dominika Ciupek, Antonio Tristán-Vega, Santiago Aja-Fernández, Maciej Malawski, Gani Ouedraogo, Julia Machnio, Paul M. Thompson, Neda Jahanshad, Eleftherios Garyfallidis, Bennett A. Landman:
Introducing QuantConn: Overcoming Challenging Diffusion Acquisitions with Harmonization. CDMRI@MICCAI 2024: 164-174 - [c177]Jeya Maria Jose Valanarasu, Yucheng Tang, Dong Yang, Ziyue Xu, Can Zhao, Wenqi Li, Vishal M. Patel, Bennett Allan Landman, Daguang Xu, Yufan He, Vishwesh Nath:
Disruptive Autoencoders: Leveraging Low-level features for 3D Medical Image Pre-training. MIDL 2024: 1553-1570 - [i112]Ho Hin Lee, Adam M. Saunders, Michael E. Kim, Samuel W. Remedios, Yucheng Tang, Qi Yang, Xin Yu, Shunxing Bao, Chloe Cho, Louise A. Mawn, Tonia S. Rex, Kevin L. Schey, Blake E. Dewey, Jeffrey M. Spraggins, Jerry L. Prince, Yuankai Huo, Bennett A. Landman:
Super-Resolution Multi-Contrast Unbiased Eye Atlases With Deep Probabilistic Refinement. CoRR abs/2401.03060 (2024) - [i111]Lucas W. Remedios, Shunxing Bao, Samuel W. Remedios, Ho Hin Lee, Leon Y. Cai, Thomas Z. Li, Ruining Deng, Can Cui, Jia Li, Qi Liu, Ken S. Lau, Joseph T. Roland, Mary K. Washington, Lori A. Coburn, Keith T. Wilson, Yuankai Huo, Bennett A. Landman:
Nucleus subtype classification using inter-modality learning. CoRR abs/2401.05602 (2024) - [i110]Ho Hin Lee, Yu Gu, Theodore Zhao, Yanbo Xu, Jianwei Yang, Naoto Usuyama, Cliff Wong, Mu Wei, Bennett A. Landman, Yuankai Huo, Alberto Santamaría-Pang, Hoifung Poon:
Foundation Models for Biomedical Image Segmentation: A Survey. CoRR abs/2401.07654 (2024) - [i109]Thomas A. Lasko, John M. Still, Thomas Z. Li, Marco Barbero Mota, William W. Stead, Eric V. Strobl, Bennett A. Landman, Fabien Maldonado:
Unsupervised Discovery of Clinical Disease Signatures Using Probabilistic Independence. CoRR abs/2402.05802 (2024) - [i108]Chenyu Gao, Shunxing Bao, Michael E. Kim, Nancy Newlin, Praitayini Kanakaraj, Tianyuan Yao, Gaurav Rudravaram, Yuankai Huo, Daniel Moyer, Kurt Schilling, Walter Kukull, Arthur W. Toga, Derek B. Archer, Timothy J. Hohman, Bennett A. Landman, Zhiyuan Li:
Field-of-View Extension for Diffusion MRI via Deep Generative Models. CoRR abs/2405.03652 (2024) - [i107]Xin Yu, Qi Yang, Han Liu, Ho Hin Lee, Yucheng Tang, Lucas W. Remedios, Michael E. Kim, Shunxing Bao, Ann Xenobia Moore, Luigi Ferrucci, Bennett A. Landman:
Enhancing Single-Slice Segmentation with 3D-to-2D Unpaired Scan Distillation. CoRR abs/2406.12254 (2024) - [i106]Lucas W. Remedios, Shunxing Bao, Samuel W. Remedios, Ho Hin Lee, Leon Y. Cai, Thomas Z. Li, Ruining Deng, Nancy R. Newlin, Adam M. Saunders, Can Cui, Jia Li, Qi Liu, Ken S. Lau, Joseph T. Roland, Mary K. Washington, Lori A. Coburn, Keith T. Wilson, Yuankai Huo, Bennett A. Landman:
Data-driven Nucleus Subclassification on Colon H&E using Style-transferred Digital Pathology. CoRR abs/2407.06116 (2024) - [i105]Michael E. Kim, Karthik Ramadass, Chenyu Gao, Praitayini Kanakaraj, Nancy R. Newlin, Gaurav Rudravaram, Kurt G. Schilling, Blake E. Dewey, Derek B. Archer, Timothy J. Hohman, Zhiyuan Li, Shunxing Bao, Bennett A. Landman, Nazirah Mohd Khairi:
Scalable, reproducible, and cost-effective processing of large-scale medical imaging datasets. CoRR abs/2408.14611 (2024) - [i104]Lucas W. Remedios, Han Liu, Samuel W. Remedios, Lianrui Zuo, Adam M. Saunders, Shunxing Bao, Yuankai Huo, Alvin C. Powers, John Virostko, Bennett A. Landman:
Influence of Early through Late Fusion on Pancreas Segmentation from Imperfectly Registered Multimodal MRI. CoRR abs/2409.04563 (2024) - [i103]Zhiyuan Li, Tianyuan Yao, Praitayini Kanakaraj, Chenyu Gao, Shunxing Bao, Lianrui Zuo, Michael E. Kim, Nancy R. Newlin, Gaurav Rudravaram, Nazirah Mohd Khairi, Yuankai Huo, Kurt G. Schilling, Walter Kukull, Arthur W. Toga, Derek B. Archer, Timothy J. Hohman, Bennett A. Landman:
Multi-Modality Conditioned Variational U-Net for Field-of-View Extension in Brain Diffusion MRI. CoRR abs/2409.13846 (2024) - [i102]Michael E. Kim, Chenyu Gao, Karthik Ramadass, Praitayini Kanakaraj, Nancy R. Newlin, Gaurav Rudravaram, Kurt G. Schilling, Blake E. Dewey, David A. Bennett, Sid OBryant, Robert C. Barber, Derek B. Archer, Timothy J. Hohman, Shunxing Bao, Zhiyuan Li, Bennett A. Landman, Nazirah Mohd Khairi, Alzheimer's Disease Neuroimaging Initiative, HABSHD Study Team:
Scalable quality control on processing of large diffusion-weighted and structural magnetic resonance imaging datasets. CoRR abs/2409.17286 (2024) - [i101]Chenyu Gao, Michael E. Kim, Karthik Ramadass, Praitayini Kanakaraj, Aravind R. Krishnan, Adam M. Saunders, Nancy R. Newlin, Ho Hin Lee, Qi Yang, Warren D. Taylor, Brian D. Boyd, Lori L. Beason-Held, Susan M. Resnick, Lisa L. Barnes, David A. Bennett, Katherine D. Van Schaik, Derek B. Archer, Timothy J. Hohman, Angela L. Jefferson, Ivana Isgum, Daniel Moyer, Yuankai Huo, Kurt G. Schilling, Lianrui Zuo, Shunxing Bao, Nazirah Mohd Khairi, Zhiyuan Li, Christos Davatzikos, Bennett A. Landman:
Brain age identification from diffusion MRI synergistically predicts neurodegenerative disease. CoRR abs/2410.22454 (2024) - [i100]Xinran Liu, Yikun Bai, Rocio Diaz Martin, Kaiwen Shi, Ashkan Shahbazi, Bennett A. Landman, Catie Chang, Soheil Kolouri:
Linear Spherical Sliced Optimal Transport: A Fast Metric for Comparing Spherical Data. CoRR abs/2411.06055 (2024) - [i99]Nancy R. Newlin, Kurt Schilling, Serge Koudoro, Bramsh Qamar Chandio, Praitayini Kanakaraj, Daniel Moyer, Claire E. Kelly, Sila Genc, Jian Chen, Joseph Yuan-Mou Yang, Ye Wu, Yifei He, Jiawei Zhang, Qingrun Zeng, Fan Zhang, Nagesh Adluru, Vishwesh Nath, Sudhir K. Pathak, Walter Schneider, Anurag Gade, Yogesh Rathi, Tom Hendriks, Anna Vilanova, Maxime Chamberland, Tomasz Pieciak, Dominika Ciupek, Antonio Tristán-Vega, Santiago Aja-Fernández, Maciej Malawski, Gani Ouedraogo, Julia Machnio, Christian Ewert, Paul M. Thompson, Neda Jahanshad, Eleftherios Garyfallidis, Bennett A. Landman:
MICCAI-CDMRI 2023 QuantConn Challenge Findings on Achieving Robust Quantitative Connectivity through Harmonized Preprocessing of Diffusion MRI. CoRR abs/2411.09618 (2024) - 2023
- [j93]Yue Liu, Shunxing Bao, Dario J. Englot, Victoria L. Morgan, Warren D. Taylor, Ying Wei, Ipek Oguz, Bennett A. Landman, Ilwoo Lyu:
Hierarchical particle optimization for cortical shape correspondence in temporal lobe resection. Comput. Biol. Medicine 152: 106414 (2023) - [j92]Jun Li, Junyu Chen, Yucheng Tang, Ce Wang, Bennett A. Landman, S. Kevin Zhou:
Transforming medical imaging with Transformers? A comparative review of key properties, current progresses, and future perspectives. Medical Image Anal. 85: 102762 (2023) - [j91]Kaiwen Xu, Thomas Z. Li, Mirza S. Khan, Riqiang Gao, Sanja L. Antic, Yuankai Huo, Kim L. Sandler, Fabien Maldonado, Bennett A. Landman:
Body composition assessment with limited field-of-view computed tomography: A semantic image extension perspective. Medical Image Anal. 88: 102852 (2023) - [j90]Xin Yu, Qi Yang, Yinchi Zhou, Leon Y. Cai, Riqiang Gao, Ho Hin Lee, Thomas Z. Li, Shunxing Bao, Zhoubing Xu, Thomas A. Lasko, Richard G. Abramson, Zizhao Zhang, Yuankai Huo, Bennett A. Landman, Yucheng Tang:
UNesT: Local spatial representation learning with hierarchical transformer for efficient medical segmentation. Medical Image Anal. 90: 102939 (2023) - [j89]Kurt G. Schilling, Shreyas Fadnavis, Joshua Batson, Mereze Visagie, Anna J. E. Combes, Samantha By, Colin D. Mcknight, Francesca Bagnato, Eleftherios Garyfallidis, Bennett A. Landman, Seth A. Smith, Kristin P. O'Grady:
Denoising of diffusion MRI in the cervical spinal cord - effects of denoising strategy and acquisition on intra-cord contrast, signal modeling, and feature conspicuity. NeuroImage 266: 119826 (2023) - [j88]Gabriel Girard, Jonathan Rafael-Patino, Raphaël Truffet, Dogu Baran Aydogan, Nagesh Adluru, Veena A. Nair, Vivek Prabhakaran, Barbara B. Bendlin, Andrew L. Alexander, Sara Bosticardo, Ilaria Gabusi, Mario Ocampo-Pineda, Matteo Battocchio, Zuzana Piskorova, Pietro Bontempi, Simona Schiavi, Alessandro Daducci, Aleksandra Stafiej, Dominika Ciupek, Fabian Bogusz, Tomasz Pieciak, Matteo Frigo, Sara Sedlar, Samuel Deslauriers-Gauthier, Ivana Kojcic, Mauro Zucchelli, Hiba Laghrissi, Yang Ji, Rachid Deriche, Kurt G. Schilling, Bennett A. Landman, Alberto Cacciola, Gianpaolo Antonio Basile, Salvatore Bertino, Nancy Newlin, Praitayini Kanakaraj, Francois Rheault, Patryk Filipiak, Timothy M. Shepherd, Ying-Chia Lin, Dimitris G. Placantonakis, Fernando E. Boada, Steven H. Baete, Erick Hernandez-Gutierrez, Alonso Ramirez-Manzanares, Ricardo Coronado-Leija, Pablo Stack-Sánchez, Luis Concha, Maxime Descoteaux, Sina Mansour L., Caio Seguin, Andrew Zalesky, Kenji Marshall, Erick Jorge Canales-Rodríguez, Ye Wu, Sahar Ahmad, Pew-Thian Yap, Antoine Théberge, Florence Gagnon, Frédéric Massi, Elda Fischi Gomez, Remy Gardier, Juan Luis Villarreal-Haro, Marco Pizzolato, Emmanuel Caruyer, Jean-Philippe Thiran:
Tractography passes the test: Results from the diffusion-simulated connectivity (disco) challenge. NeuroImage 277: 120231 (2023) - [j87]Yurui Gao, Yu Zhao, Muwei Li, Richard D. Lawless, Kurt G. Schilling, Lyuan Xu, Andrea T. Shafer, Lori L. Beason-Held, Susan M. Resnick, Baxter P. Rogers, Zhaohua Ding, Adam W. Anderson, Bennett A. Landman, John C. Gore:
Functional alterations in bipartite network of white and grey matters during aging. NeuroImage 278: 120277 (2023) - [j86]Ho Hin Lee, Yucheng Tang, Qi Yang, Xin Yu, Leon Y. Cai, Lucas W. Remedios, Shunxing Bao, Bennett A. Landman, Yuankai Huo:
Semantic-Aware Contrastive Learning for Multi-Object Medical Image Segmentation. IEEE J. Biomed. Health Informatics 27(9): 4444-4453 (2023) - [j85]Alessa Hering, Lasse Hansen, Tony C. W. Mok, Albert C. S. Chung, Hanna Siebert, Stephanie Häger, Annkristin Lange, Sven Kuckertz, Stefan Heldmann, Wei Shao, Sulaiman Vesal, Mirabela Rusu, Geoffrey A. Sonn, Théo Estienne, Maria Vakalopoulou, Luyi Han, Yunzhi Huang, Pew-Thian Yap, Mikael Brudfors, Yaël Balbastre, Samuel Joutard, Marc Modat, Gal Lifshitz, Dan Raviv, Jinxin Lv, Qiang Li, Vincent Jaouen, Dimitris Visvikis, Constance Fourcade, Mathieu Rubeaux, Wentao Pan, Zhe Xu, Bailiang Jian, Francesca De Benetti, Marek Wodzinski, Niklas Gunnarsson, Jens Sjölund, Daniel Grzech, Huaqi Qiu, Zeju Li, Alexander Thorley, Jinming Duan, Christoph Großbröhmer, Andrew Hoopes, Ingerid Reinertsen, Yiming Xiao, Bennett A. Landman, Yuankai Huo, Keelin Murphy, Nikolas Lessmann, Bram van Ginneken, Adrian V. Dalca, Mattias P. Heinrich:
Learn2Reg: Comprehensive Multi-Task Medical Image Registration Challenge, Dataset and Evaluation in the Era of Deep Learning. IEEE Trans. Medical Imaging 42(3): 697-712 (2023) - [c176]Jie Liu, Yixiao Zhang, Jieneng Chen, Junfei Xiao, Yongyi Lu, Bennett A. Landman, Yixuan Yuan, Alan L. Yuille, Yucheng Tang, Zongwei Zhou:
CLIP-Driven Universal Model for Organ Segmentation and Tumor Detection. ICCV 2023: 21095-21107 - [c175]Ho Hin Lee, Shunxing Bao, Yuankai Huo, Bennett A. Landman:
3D UX-Net: A Large Kernel Volumetric ConvNet Modernizing Hierarchical Transformer for Medical Image Segmentation. ICLR 2023 - [c174]Tianyuan Yao, Nancy Newlin, Praitayini Kanakaraj, Vishwesh Nath, Leon Y. Cai, Karthik Ramadass, Kurt Schilling, Bennett A. Landman, Yuankai Huo:
A Unified Learning Model for Estimating Fiber Orientation Distribution Functions on Heterogeneous Multi-shell Diffusion-Weighted MRI. CDMRI@MICCAI 2023: 13-22 - [c173]Can Cui, Yaohong Wang, Shunxing Bao, Yucheng Tang, Ruining Deng, Lucas W. Remedios, Zuhayr Asad, Joseph T. Roland, Ken S. Lau, Qi Liu, Lori A. Coburn, Keith T. Wilson, Bennett A. Landman, Yuankai Huo:
Feasibility of Universal Anomaly Detection Without Knowing the Abnormality in Medical Images. MILLanD@MICCAI 2023: 82-92 - [c172]Ho Hin Lee, Quan Liu, Shunxing Bao, Qi Yang, Xin Yu, Leon Y. Cai, Thomas Z. Li, Yuankai Huo, Xenofon D. Koutsoukos, Bennett A. Landman:
Scaling up 3D Kernels with Bayesian Frequency Re-parameterization for Medical Image Segmentation. MICCAI (4) 2023: 632-641 - [c171]Thomas Z. Li, John M. Still, Kaiwen Xu, Ho Hin Lee, Leon Y. Cai, Aravind R. Krishnan, Riqiang Gao, Mirza S. Khan, Sanja Antic, Michael N. Kammer, Kim L. Sandler, Fabien Maldonado, Bennett A. Landman, Thomas A. Lasko:
Longitudinal Multimodal Transformer Integrating Imaging and Latent Clinical Signatures from Routine EHRs for Pulmonary Nodule Classification. MICCAI (2) 2023: 649-659 - [c170]Leon Yichen Cai, Ho Hin Lee, Nancy Rose Newlin, Cailey Irene Kerley, Praitayini Kanakaraj, Qi Yang, Graham Walter Johnson, Daniel Moyer, Kurt Gregory Schilling, Francois Rheault, Bennett A. Landman:
Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context. MIDL 2023: 1124-1143 - [c169]Shunxing Bao, Ho Hin Lee, Qi Yang, Lucas Walker Remedios, Ruining Deng, Can Cui, Leon Yichen Cai, Kaiwen Xu, Xin Yu, Sophie Chiron, Yike Li, Nathan Heath Patterson, Yaohong Wang, Jia Li, Qi Liu, Ken S. Lau, Joseph T. Roland, Lori A. Coburn, Keith T. Wilson, Bennett A. Landman, Yuankai Huo:
Alleviating tiling effect by random walk sliding window in high-resolution histological whole slide image synthesis. MIDL 2023: 1406-1422 - [c168]Shunxing Bao, Can Cui, Jia Li, Yucheng Tang, Ho Hin Lee, Ruining Deng, Lucas W. Remedios, Xin Yu, Qi Yang, Sophie Chiron, Nathan Heath Patterson, Ken S. Lau, Qi Liu, Joseph T. Roland, Lori A. Coburn, Keith T. Wilson, Bennett A. Landman, Yuankai Huo:
Topological-preserving membrane skeleton segmentation in multiplex immunofluorescence imaging. Digital and Computational Pathology 2023 - [c167]Can Cui, Shunxing Bao, Jia Li, Ruining Deng, Lucas W. Remedios, Zuhayr Asad, Sophie Chiron, Ken S. Lau, Yaohong Wang, Lori A. Coburn, Keith T. Wilson, Joseph T. Roland, Bennett A. Landman, Qi Liu, Yuankai Huo:
Influence of cell-type ratio on spatially resolved single-cell transcriptomes using the Tangram algorithm: based on implementation on single-cell and MxIF data. Digital and Computational Pathology 2023 - [c166]Lucas W. Remedios, Shunxing Bao, Cailey I. Kerley, Leon Y. Cai, François Rheault, Ruining Deng, Can Cui, Sophie Chiron, Ken S. Lau, Joseph T. Roland, Mary K. Washington, Lori A. Coburn, Keith T. Wilson, Yuankai Huo, Bennett A. Landman:
Predicting Crohn's disease severity in the colon using mixed cell nucleus density from pseudo labels. Digital and Computational Pathology 2023 - [c165]Xin Yu, Yucheng Tang, Qi Yang, Ho Hin Lee, Riqiang Gao, Shunxing Bao, Ann Zenobia Moore, Luigi Ferrucci, Bennett A. Landman:
Longitudinal variability analysis on low-dose abdominal CT with deep learning-based segmentation. Image Processing 2023 - [c164]Lucie Dole, Kurt G. Schilling, Hakmook Kang, John C. Gore, Bennett A. Landman:
Harmonization of repetition time and scanner effects on estimates of brain hemodynamic response function. Image Processing 2023 - [c163]Yurui Gao, Dylan R. Lawless, Muwei Li, Yu Zhao, Kurt G. Schilling, Lyuan Xu, Andrea T. Shafer, Lori L. Beason-Held, Susan M. Resnick, Baxter P. Rogers, Zhaohua Ding, Adam W. Anderson, Bennett A. Landman, John C. Gore:
Automatic preprocessing pipeline for white matter functional analyses of large-scale databases. Image Processing 2023 - [c162]Praitayini Kanakaraj, Francois Rheault, Leon Y. Cai, Nancy Newlin, Fang-Cheng Yeh, Baxter P. Rogers, Kurt G. Schilling, Bennett A. Landman:
Mapping the impact of approximate gradient nonlinearity fields correction on tractography. Image Processing 2023 - [c161]Cailey I. Kerley, Leon Y. Cai, Yucheng Tang, Lori L. Beason-Held, Susan M. Resnick, Laurie E. Cutting, Bennett A. Landman:
Batch size go big or go home: counterintuitive improvement in medical autoencoders with smaller batch size. Image Processing 2023 - [c160]Bennett A. Landman:
Design and implementation of a real-time research data warehouse: lessons learned from Vanderbilt's ImageVU (Conference Presentation). Image Processing 2023 - [c159]Ho Hin Lee, Yucheng Tang, Shunxing Bao, Qi Yang, Xin Yu, Kevin L. Schey, Jeffrey M. Spraggins, Yuankai Huo, Bennett A. Landman:
Unsupervised registration refinement for generating unbiased eye atlas. Image Processing 2023 - [c158]Thomas Z. Li, Kaiwen Xu, Riqiang Gao, Yucheng Tang, Thomas A. Lasko, Fabien Maldonado, Kim L. Sandler, Bennett A. Landman:
Time-distance vision transformers in lung cancer diagnosis from longitudinal computed tomography. Image Processing 2023 - [c157]Nancy R. Newlin, Leon Y. Cai, Tianyuan Yao, Derek B. Archer, Kurt G. Schilling, Timothy J. Hohman, Kimberly R. Pechman, Angela L. Jefferson, Andrea T. Shafer, Susan M. Resnick, Bennett A. Landman:
Comparing voxel- and feature-wise harmonization of complex graph measures from multiple sites for structural brain network investigation of aging. Image Processing 2023 - [c156]Karthik Ramadass, Xin Yu, Leon Y. Cai, Yucheng Tang, Shunxing Bao, Cailey I. Kerley, Micah D'Archangel, Laura A. Barquero, Allen T. Newton, Isabel Gauthier, Rankin W. McGugin, Benoit M. Dawant, Laurie E. Cutting, Yuankai Huo, Bennett A. Landman:
Deep whole brain segmentation of 7T structural MRI. Image Processing 2023 - [c155]Kaiwen Xu, Mirza S. Khan, Thomas Z. Li, Riqiang Gao, Sanja L. Antic, Yuankai Huo, Kim L. Sandler, Fabien Maldonado, Bennett A. Landman:
Stratification of lung cancer risk with thoracic imaging phenotypes. Image Processing 2023 - [c154]Tianyuan Yao, Francois Rheault, Leon Y. Cai, Vishwesh Nath, Zuhayr Asad, Nancy Newlin, Can Cui, Ruining Deng, Karthik Ramadass, Kurt Schilling, Bennett A. Landman, Yuankai Huo:
Deep constrained spherical deconvolution for robust harmonization. Image Processing 2023 - [c153]Tian Yu, Leon Y. Cai, Victoria L. Morgan, Sarah E. Goodale, Dario J. Englot, Catherine E. Chang, Bennett A. Landman, Kurt G. Schilling:
SynBOLD-DisCo: synthetic BOLD images for distortion correction of fMRI without additional calibration scans. Image Processing 2023 - [e11]M. Emre Celebi, Md Sirajus Salekin, Hyunwoo J. Kim, Shadi Albarqouni, Catarina Barata, Allan Halpern, Philipp Tschandl, Marc Combalia, Yuan Liu, Ghada Zamzmi, Joshua Levy, Huzefa Rangwala, Annika Reinke, Diya Wynn, Bennett A. Landman, Won-Ki Jeong, Yiqing Shen, Zhongying Deng, Spyridon Bakas, Xiaoxiao Li, Chen Qin, Nicola Rieke, Holger Roth, Daguang Xu:
Medical Image Computing and Computer Assisted Intervention - MICCAI 2023 Workshops - ISIC 2023, Care-AI 2023, MedAGI 2023, DeCaF 2023, Held in Conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8-12, 2023, Proceedings. Lecture Notes in Computer Science 14393, Springer 2023, ISBN 978-3-031-47400-2 [contents] - [e10]Ipek Oguz, Jack H. Noble, Xiaoxiao Li, Martin Styner, Christian Baumgartner, Mirabela Rusu, Tobias Heimann, Despina Kontos, Bennett A. Landman, Benoit M. Dawant:
Medical Imaging with Deep Learning, MIDL 2023, 10-12 July 2023, Nashville, TN, USA. Proceedings of Machine Learning Research 227, PMLR 2023 [contents] - [d8]Qi Yang, Xin Yu, Shunxing Bao, Bennett A. Landman:
Single Slice Thigh CT Muscle Group Segmentation with Domain Adaptation and Self-Training. Zenodo, 2023
- [i98]Jie Liu, Yixiao Zhang, Jieneng Chen, Junfei Xiao, Yongyi Lu, Bennett A. Landman, Yixuan Yuan, Alan L. Yuille, Yucheng Tang, Zongwei Zhou:
CLIP-Driven Universal Model for Organ Segmentation and Tumor Detection. CoRR abs/2301.00785 (2023) - [i97]Annika Reinke, Minu Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Carole H. Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B. Blaschko, Florian Büttner, M. Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A. Cimini, Gary S. Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Robert Haase, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Jens Kleesiek, Florian Kofler, Thijs Kooi, Annette Kopp-Schneider, Michal Kozubek, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani,