{"id":"https:\/\/openalex.org\/W1986458819","doi":"https:\/\/doi.org\/10.4249\/scholarpedia.1378","title":"Neuron simulation environment","display_name":"Neuron simulation environment","publication_year":2007,"publication_date":"2007-01-01","ids":{"openalex":"https:\/\/openalex.org\/W1986458819","doi":"https:\/\/doi.org\/10.4249\/scholarpedia.1378","mag":"1986458819"},"language":"en","primary_location":{"id":"doi:10.4249\/scholarpedia.1378","is_oa":true,"landing_page_url":"https:\/\/doi.org\/10.4249\/scholarpedia.1378","pdf_url":null,"source":{"id":"https:\/\/openalex.org\/S177062229","display_name":"Scholarpedia","issn_l":"1941-6016","issn":["1941-6016"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https:\/\/openalex.org\/P4310316840","host_organization_name":"Scholarpedia Corporation","host_organization_lineage":["https:\/\/openalex.org\/P4310316840"],"host_organization_lineage_names":["Scholarpedia Corporation"],"type":"journal"},"license":"cc-by-nc-sa","license_id":"https:\/\/openalex.org\/licenses\/cc-by-nc-sa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scholarpedia","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https:\/\/doi.org\/10.4249\/scholarpedia.1378","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https:\/\/openalex.org\/A5090459968","display_name":"Ted Carnevale","orcid":null},"institutions":[{"id":"https:\/\/openalex.org\/I32971472","display_name":"Yale University","ror":"https:\/\/ror.org\/03v76x132","country_code":"US","type":"education","lineage":["https:\/\/openalex.org\/I32971472"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ted Carnevale","raw_affiliation_strings":["Yale University  ;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Yale University  ;","institution_ids":["https:\/\/openalex.org\/I32971472"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https:\/\/openalex.org\/A5090459968"],"corresponding_institution_ids":["https:\/\/openalex.org\/I32971472"],"apc_list":null,"apc_paid":null,"fwci":0.5652,"has_fulltext":false,"cited_by_count":34,"citation_normalized_percentile":{"value":0.64567953,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"2","issue":"6","first_page":"1378","last_page":"1378"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https:\/\/openalex.org\/T10581","display_name":"Neural dynamics and brain function","score":0.9994999766349792,"subfield":{"id":"https:\/\/openalex.org\/subfields\/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https:\/\/openalex.org\/fields\/28","display_name":"Neuroscience"},"domain":{"id":"https:\/\/openalex.org\/domains\/1","display_name":"Life Sciences"}},"topics":[{"id":"https:\/\/openalex.org\/T10581","display_name":"Neural dynamics and brain function","score":0.9994999766349792,"subfield":{"id":"https:\/\/openalex.org\/subfields\/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https:\/\/openalex.org\/fields\/28","display_name":"Neuroscience"},"domain":{"id":"https:\/\/openalex.org\/domains\/1","display_name":"Life Sciences"}},{"id":"https:\/\/openalex.org\/T11601","display_name":"Neuroscience and Neural Engineering","score":0.9988999962806702,"subfield":{"id":"https:\/\/openalex.org\/subfields\/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https:\/\/openalex.org\/fields\/28","display_name":"Neuroscience"},"domain":{"id":"https:\/\/openalex.org\/domains\/1","display_name":"Life Sciences"}},{"id":"https:\/\/openalex.org\/T10502","display_name":"Advanced Memory and Neural Computing","score":0.9921000003814697,"subfield":{"id":"https:\/\/openalex.org\/subfields\/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https:\/\/openalex.org\/fields\/22","display_name":"Engineering"},"domain":{"id":"https:\/\/openalex.org\/domains\/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https:\/\/openalex.org\/keywords\/computer-science","display_name":"Computer science","score":0.6628785133361816},{"id":"https:\/\/openalex.org\/keywords\/neuron","display_name":"Neuron","score":0.6524555087089539},{"id":"https:\/\/openalex.org\/keywords\/domain","display_name":"Domain (mathematical analysis)","score":0.5341631174087524},{"id":"https:\/\/openalex.org\/keywords\/spike","display_name":"Spike (software development)","score":0.498610258102417},{"id":"https:\/\/openalex.org\/keywords\/neuroscience","display_name":"Neuroscience","score":0.4756302833557129},{"id":"https:\/\/openalex.org\/keywords\/accession","display_name":"Accession","score":0.4608786404132843},{"id":"https:\/\/openalex.org\/keywords\/complement","display_name":"Complement (music)","score":0.4324650168418884},{"id":"https:\/\/openalex.org\/keywords\/axon","display_name":"Axon","score":0.4225071966648102},{"id":"https:\/\/openalex.org\/keywords\/artificial-intelligence","display_name":"Artificial intelligence","score":0.42165112495422363},{"id":"https:\/\/openalex.org\/keywords\/cognitive-science","display_name":"Cognitive science","score":0.32967767119407654},{"id":"https:\/\/openalex.org\/keywords\/biology","display_name":"Biology","score":0.1494462490081787},{"id":"https:\/\/openalex.org\/keywords\/psychology","display_name":"Psychology","score":0.10615396499633789},{"id":"https:\/\/openalex.org\/keywords\/mathematics","display_name":"Mathematics","score":0.10190555453300476},{"id":"https:\/\/openalex.org\/keywords\/economics","display_name":"Economics","score":0.0926494300365448}],"concepts":[{"id":"https:\/\/openalex.org\/C41008148","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q21198","display_name":"Computer science","level":0,"score":0.6628785133361816},{"id":"https:\/\/openalex.org\/C2778794669","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q43054","display_name":"Neuron","level":2,"score":0.6524555087089539},{"id":"https:\/\/openalex.org\/C36503486","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5341631174087524},{"id":"https:\/\/openalex.org\/C2781390188","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q25203449","display_name":"Spike (software development)","level":2,"score":0.498610258102417},{"id":"https:\/\/openalex.org\/C169760540","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q207011","display_name":"Neuroscience","level":1,"score":0.4756302833557129},{"id":"https:\/\/openalex.org\/C2778221078","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q567586","display_name":"Accession","level":3,"score":0.4608786404132843},{"id":"https:\/\/openalex.org\/C112313634","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q7886648","display_name":"Complement (music)","level":5,"score":0.4324650168418884},{"id":"https:\/\/openalex.org\/C2779530196","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q178999","display_name":"Axon","level":2,"score":0.4225071966648102},{"id":"https:\/\/openalex.org\/C154945302","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q11660","display_name":"Artificial intelligence","level":1,"score":0.42165112495422363},{"id":"https:\/\/openalex.org\/C188147891","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q147638","display_name":"Cognitive science","level":1,"score":0.32967767119407654},{"id":"https:\/\/openalex.org\/C86803240","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q420","display_name":"Biology","level":0,"score":0.1494462490081787},{"id":"https:\/\/openalex.org\/C15744967","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q9418","display_name":"Psychology","level":0,"score":0.10615396499633789},{"id":"https:\/\/openalex.org\/C33923547","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q395","display_name":"Mathematics","level":0,"score":0.10190555453300476},{"id":"https:\/\/openalex.org\/C162324750","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q8134","display_name":"Economics","level":0,"score":0.0926494300365448},{"id":"https:\/\/openalex.org\/C55493867","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q7094","display_name":"Biochemistry","level":1,"score":0},{"id":"https:\/\/openalex.org\/C2910001868","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q458","display_name":"European union","level":2,"score":0},{"id":"https:\/\/openalex.org\/C134306372","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q7754","display_name":"Mathematical analysis","level":1,"score":0},{"id":"https:\/\/openalex.org\/C127716648","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q104053","display_name":"Phenotype","level":3,"score":0},{"id":"https:\/\/openalex.org\/C188082640","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q1780899","display_name":"Complementation","level":4,"score":0},{"id":"https:\/\/openalex.org\/C115903868","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q80993","display_name":"Software engineering","level":1,"score":0},{"id":"https:\/\/openalex.org\/C105639569","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q582577","display_name":"Economic policy","level":1,"score":0},{"id":"https:\/\/openalex.org\/C104317684","wikidata":"https:\/\/www.wikidata.org\/wiki\/Q7187","display_name":"Gene","level":2,"score":0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.4249\/scholarpedia.1378","is_oa":true,"landing_page_url":"https:\/\/doi.org\/10.4249\/scholarpedia.1378","pdf_url":null,"source":{"id":"https:\/\/openalex.org\/S177062229","display_name":"Scholarpedia","issn_l":"1941-6016","issn":["1941-6016"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https:\/\/openalex.org\/P4310316840","host_organization_name":"Scholarpedia Corporation","host_organization_lineage":["https:\/\/openalex.org\/P4310316840"],"host_organization_lineage_names":["Scholarpedia Corporation"],"type":"journal"},"license":"cc-by-nc-sa","license_id":"https:\/\/openalex.org\/licenses\/cc-by-nc-sa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scholarpedia","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.4249\/scholarpedia.1378","is_oa":true,"landing_page_url":"https:\/\/doi.org\/10.4249\/scholarpedia.1378","pdf_url":null,"source":{"id":"https:\/\/openalex.org\/S177062229","display_name":"Scholarpedia","issn_l":"1941-6016","issn":["1941-6016"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https:\/\/openalex.org\/P4310316840","host_organization_name":"Scholarpedia Corporation","host_organization_lineage":["https:\/\/openalex.org\/P4310316840"],"host_organization_lineage_names":["Scholarpedia Corporation"],"type":"journal"},"license":"cc-by-nc-sa","license_id":"https:\/\/openalex.org\/licenses\/cc-by-nc-sa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scholarpedia","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https:\/\/openalex.org\/W141744390","https:\/\/openalex.org\/W167284886","https:\/\/openalex.org\/W602834913","https:\/\/openalex.org\/W1585759819","https:\/\/openalex.org\/W1601216305","https:\/\/openalex.org\/W1781851538","https:\/\/openalex.org\/W1970387870","https:\/\/openalex.org\/W2032194349","https:\/\/openalex.org\/W2042836271","https:\/\/openalex.org\/W2082354908","https:\/\/openalex.org\/W2103296959","https:\/\/openalex.org\/W2104749146","https:\/\/openalex.org\/W2111592937","https:\/\/openalex.org\/W2120312217","https:\/\/openalex.org\/W2139114760","https:\/\/openalex.org\/W2140379071","https:\/\/openalex.org\/W2158045342","https:\/\/openalex.org\/W2164054172","https:\/\/openalex.org\/W2168779967","https:\/\/openalex.org\/W2170402833"],"related_works":["https:\/\/openalex.org\/W1484230599","https:\/\/openalex.org\/W2503833497","https:\/\/openalex.org\/W958484998","https:\/\/openalex.org\/W2808055852","https:\/\/openalex.org\/W4206299168","https:\/\/openalex.org\/W1720180484","https:\/\/openalex.org\/W2770205670","https:\/\/openalex.org\/W4252726756","https:\/\/openalex.org\/W2001071785","https:\/\/openalex.org\/W3128475997"],"abstract_inverted_index":{"Domain":[0],"of":[1,29,72,99,107,114,127,146,168,192,212],"Utility":[2],"NEURON":[3],"is":[4],"a":[5,34,95,205],"\u201cdomain-specific\u201d":[6],"simulator":[7],"in":[8,64,76],"the":[9,105,143,210],"sense":[10],"that,":[11],"by":[12],"design,":[13],"it":[14,19,93],"has":[15,131],"features":[16],"that":[17,160,214],"make":[18],"particularly":[20],"well":[21],"suited":[22],"for":[23,52],"constructing":[24],"and":[25,39,62,80,91,121,125,137,151,165,190],"simulating":[26],"certain":[27],"kinds":[28],"models.":[30],"It":[31,130],"emerged":[32],"from":[33,82],"collaboration":[35],"between":[36],"John":[37],"Moore":[38],"Michael":[40],"Hines":[41],"at":[42],"Duke":[43],"University.":[44],"Their":[45],"initial":[46],"aim":[47],"was":[48],"to":[49,55,78,87,94,135],"develop":[50],"software":[51,90],"models":[53,113,139,167,213],"used":[54,134],"complement":[56],"experimental":[57],"research":[58],"on":[59,209],"spike":[60],"initiation":[61],"conduction":[63],"squid":[65],"axon":[66],"(Hines":[67],"1992,":[68],"1994).":[69],"NEURON\u2019s":[70],"domain":[71,109],"utility":[73],"subsequently":[74],"broadened":[75],"response":[77],"requests":[79],"contributions":[81],"other":[83],"neuroscientists":[84],"who":[85],"began":[86],"adopt":[88],"their":[89],"apply":[92],"much":[96],"wider":[97],"range":[98,211],"problems":[100],"(see":[101],"http:\/\/neuron.yale.edu\/neuron\/":[102],"credits).":[103],"At":[104],"center":[106],"this":[108],"are":[110],"anatomically":[111],"detailed":[112,118],"biological":[115,169],"neurons":[116,170],"with":[117],"anatomical":[119],"structure":[120],"complex":[122],"membrane":[123],"properties,":[124],"networks":[126,145,191],"such":[128],"neurons.":[129],"also":[132],"been":[133,216],"implement":[136],"simulate":[138],"as":[140,142],"diverse":[141],"following:":[144],"artificial":[147,162],"spiking":[148,163],"cells":[149,164,181],"(Lytton":[150],"Omurtag":[152],"(2007),":[153],"ModelDB":[154,175,186,200],"accession":[155,176,187,201],"number":[156,177,188,202],"105507);":[157],"hybrid":[158],"nets":[159],"combine":[161],"mechanistic":[166],"(Yu":[171],"et":[172,183,197],"al.":[173,184,198],"(2013),":[174],"144570);":[178],"cardiac":[179],"muscle":[180,195],"(Courtemanche":[182],"(1998),":[185],"3800);":[189],"arteriolar":[193],"smooth":[194],"(Crane":[196],"(2001),":[199],"3785).":[203],"For":[204],"more":[206],"complete":[207],"perspective":[208],"have":[215]},"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":5},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}