{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,2,21]],"date-time":"2025-02-21T04:11:39Z","timestamp":1740111099498,"version":"3.37.3"},"reference-count":32,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2024,8,1]],"date-time":"2024-08-01T00:00:00Z","timestamp":1722470400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2024,8,1]],"date-time":"2024-08-01T00:00:00Z","timestamp":1722470400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"}],"funder":[{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Computational Statistics &amp; Data Analysis"],"published-print":{"date-parts":[[2024,8]]},"DOI":"10.1016\/j.csda.2024.107959","type":"journal-article","created":{"date-parts":[[2024,4,8]],"date-time":"2024-04-08T16:14:52Z","timestamp":1712592892000},"page":"107959","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"special_numbering":"C","title":["Sufficient dimension reduction for a novel class of zero-inflated graphical models"],"prefix":"10.1016","volume":"196","author":[{"given":"Eric","family":"Koplin","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Liliana","family":"Forzani","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Diego","family":"Tomassi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ruth M.","family":"Pfeiffer","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"key":"10.1016\/j.csda.2024.107959_br0010","doi-asserted-by":"crossref","first-page":"4385","DOI":"10.1098\/rsta.2009.0110","article-title":"Sufficient dimension reduction and prediction in regression","volume":"367","author":"Adragni","year":"2009","journal-title":"Philos. Trans. R. Soc. A, Math. Phys. Eng. Sci."},{"year":"1986","series-title":"The Statistical Analysis of Compositional Data","author":"Aitchison","key":"10.1016\/j.csda.2024.107959_br0020"},{"key":"10.1016\/j.csda.2024.107959_br0030","doi-asserted-by":"crossref","first-page":"192","DOI":"10.1111\/j.2517-6161.1974.tb00999.x","article-title":"Spatial interaction and the statistical analysis of lattice systems","volume":"36","author":"Besag","year":"1974","journal-title":"J. R. Stat. Soc., Ser. B, Stat. Methodol."},{"key":"10.1016\/j.csda.2024.107959_br0040","first-page":"179","article-title":"Statistical analysis of non-lattice data","volume":"24","author":"Besag","year":"1975","journal-title":"J. R. Stat. Soc., Ser. D, Stat."},{"key":"10.1016\/j.csda.2024.107959_br0050","doi-asserted-by":"crossref","first-page":"1313","DOI":"10.1080\/01621459.2015.1093944","article-title":"Sufficient reductions in regressions with exponential family inverse predictors","volume":"111","author":"Bura","year":"2016","journal-title":"J. Am. Stat. Assoc."},{"key":"10.1016\/j.csda.2024.107959_br0060","doi-asserted-by":"crossref","first-page":"82","DOI":"10.1186\/s12859-023-05205-3","article-title":"Coda4microbiome: compositional data analysis for microbiome cross-sectional and longitudinal studies","volume":"24","author":"Calle","year":"2023","journal-title":"BMC Bioinform."},{"key":"10.1016\/j.csda.2024.107959_br0070","series-title":"Fixed-Point Algorithms for Inverse Problems in Science and Engineering","first-page":"185","article-title":"Proximal splitting methods in signal processing","author":"Combettes","year":"2011"},{"key":"10.1016\/j.csda.2024.107959_br0080","first-page":"1","article-title":"Fisher lecture: dimension reduction in regression","volume":"22","author":"Cook","year":"2007","journal-title":"Stat. Sci."},{"key":"10.1016\/j.csda.2024.107959_br0090","doi-asserted-by":"crossref","first-page":"485","DOI":"10.1214\/08-STS275","article-title":"Principal fitted components for dimension reduction in regression","volume":"23","author":"Cook","year":"2008","journal-title":"Stat. Sci."},{"key":"10.1016\/j.csda.2024.107959_br0100","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1145\/2699466","article-title":"Algorithm 955: approximation of the inverse Poisson cumulative distribution function","volume":"42","author":"Giles","year":"2016","journal-title":"ACM Trans. Math. Softw."},{"author":"Haslett","key":"10.1016\/j.csda.2024.107959_br0110"},{"key":"10.1016\/j.csda.2024.107959_br0120","doi-asserted-by":"crossref","DOI":"10.1002\/wics.1398","article-title":"A review of multivariate distributions for count data derived from the Poisson distribution","volume":"9","author":"Inouye","year":"2017","journal-title":"Wiley Interdiscip. Rev.: Comput. Stat."},{"key":"10.1016\/j.csda.2024.107959_br0130","doi-asserted-by":"crossref","first-page":"48","DOI":"10.5534\/wjmh.190009","article-title":"Sex differences in gut microbiota","volume":"38","author":"Kim","year":"2019","journal-title":"World J. Mens Health"},{"key":"10.1016\/j.csda.2024.107959_br0140","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pcbi.1004226","article-title":"Sparse and compositionally robust inference of microbial ecological networks","volume":"11","author":"Kurtz","year":"2015","journal-title":"PLoS Comput. Biol."},{"year":"1996","series-title":"Graphical Models, vol. 17","author":"Lauritzen","key":"10.1016\/j.csda.2024.107959_br0150"},{"key":"10.1016\/j.csda.2024.107959_br0160","doi-asserted-by":"crossref","first-page":"253","DOI":"10.1186\/1471-2105-12-253","article-title":"Sparse PLS discriminant analysis: biologically relevant feature selection and graphical displays for multiclass problems","volume":"12","author":"Le Cao","year":"2011","journal-title":"BMC Bioinform."},{"key":"10.1016\/j.csda.2024.107959_br0170","doi-asserted-by":"crossref","first-page":"230","DOI":"10.1080\/10618600.2014.900500","article-title":"Learning the structure of mixed graphical models","volume":"24","author":"Lee","year":"2015","journal-title":"J. Comput. Graph. Stat."},{"key":"10.1016\/j.csda.2024.107959_br0180","series-title":"Advances in Neural Information Processing Systems","first-page":"827","article-title":"Proximal Newton-type methods for convex optimization","author":"Lee","year":"2012"},{"key":"10.1016\/j.csda.2024.107959_br0190","doi-asserted-by":"crossref","first-page":"316","DOI":"10.1080\/01621459.1991.10475035","article-title":"Sliced inverse regression for dimension reduction","volume":"86","author":"Li","year":"1991","journal-title":"J. Am. Stat. Assoc."},{"key":"10.1016\/j.csda.2024.107959_br0200","first-page":"5776","article-title":"New insights and perspectives on the natural gradient method","volume":"21","author":"Martens","year":"2020","journal-title":"J. Mach. Learn. Res."},{"key":"10.1016\/j.csda.2024.107959_br0210","doi-asserted-by":"crossref","first-page":"848","DOI":"10.1214\/18-AOAS1213","article-title":"Graphical models for zero-inflated single cell gene expression","volume":"13","author":"McDavid","year":"2019","journal-title":"Ann. Appl. Stat."},{"key":"10.1016\/j.csda.2024.107959_br0220","doi-asserted-by":"crossref","first-page":"127","DOI":"10.1561\/2400000003","article-title":"Proximal algorithms","volume":"1","author":"Parikh","year":"2014","journal-title":"Found. Trends Optim."},{"key":"10.1016\/j.csda.2024.107959_br0230","doi-asserted-by":"crossref","DOI":"10.1128\/mSystems.00053-18","article-title":"Balances: a new perspective for microbiome analysis","volume":"3","author":"Rivera-Pinto","year":"2018","journal-title":"mSystems"},{"key":"10.1016\/j.csda.2024.107959_br0240","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pcbi.1005752","article-title":"mixOmics: an R package for \u2018omics feature selection and multiple data integration","volume":"13","author":"Rohart","year":"2017","journal-title":"PLoS Comput. Biol."},{"key":"10.1016\/j.csda.2024.107959_br0250","doi-asserted-by":"crossref","DOI":"10.1093\/gigascience\/giab005","article-title":"Mb-gan: microbiome simulation via generative adversarial network","volume":"10","author":"Rong","year":"2021","journal-title":"GigaScience"},{"key":"10.1016\/j.csda.2024.107959_br0260","doi-asserted-by":"crossref","first-page":"687","DOI":"10.1093\/biostatistics\/kxz060","article-title":"Sufficient dimension reduction for compositional data","volume":"22","author":"Tomassi","year":"2019","journal-title":"Biostatistics"},{"key":"10.1016\/j.csda.2024.107959_br0270","first-page":"5","article-title":"An overview of composite likelihood methods","volume":"21","author":"Varin","year":"2011","journal-title":"Stat. Sin."},{"key":"10.1016\/j.csda.2024.107959_br0280","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1561\/2200000001","article-title":"Graphical models, exponential families, and variational inference","volume":"1","author":"Wainwright","year":"2008","journal-title":"Found. Trends Mach. Learn."},{"key":"10.1016\/j.csda.2024.107959_br0290","series-title":"Advances in Neural Information Processing Systems","first-page":"1718","article-title":"On Poisson graphical models","author":"Yang","year":"2013"},{"key":"10.1016\/j.csda.2024.107959_br0300","doi-asserted-by":"crossref","first-page":"57","DOI":"10.1007\/s10994-015-5536-6","article-title":"On data preconditioning for regularized loss minimization","volume":"103","author":"Yang","year":"2016","journal-title":"Mach. Learn."},{"key":"10.1016\/j.csda.2024.107959_br0310","doi-asserted-by":"crossref","first-page":"516","DOI":"10.3389\/fgene.2019.00516","article-title":"Microbial networks in spring-semi-parametric rank-based correlation and partial correlation estimation for quantitative microbiome data","volume":"10","author":"Yoon","year":"2019","journal-title":"Front. Genet."},{"key":"10.1016\/j.csda.2024.107959_br0320","doi-asserted-by":"crossref","first-page":"3468","DOI":"10.1214\/07-AOS584","article-title":"The composite absolute penalties family for grouped and hierarchical variable selection","volume":"37","author":"Zhao","year":"2009","journal-title":"Ann. Stat."}],"container-title":["Computational Statistics &amp; Data Analysis"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0167947324000434?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0167947324000434?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2024,5,11]],"date-time":"2024-05-11T19:36:58Z","timestamp":1715456218000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0167947324000434"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,8]]},"references-count":32,"alternative-id":["S0167947324000434"],"URL":"https:\/\/doi.org\/10.1016\/j.csda.2024.107959","relation":{},"ISSN":["0167-9473"],"issn-type":[{"type":"print","value":"0167-9473"}],"subject":[],"published":{"date-parts":[[2024,8]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Sufficient dimension reduction for a novel class of zero-inflated graphical models","name":"articletitle","label":"Article Title"},{"value":"Computational Statistics & Data Analysis","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.csda.2024.107959","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"Published by Elsevier B.V.","name":"copyright","label":"Copyright"}],"article-number":"107959"}}